RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ZNF506Q5JVG8 444 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 C6orf52Q5T4I8 152 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 PGAP1Q75T13 922 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 STRADAQ7RTN6 431 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 RDH10Q8IZV5 341 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 SYS1Q8N2H4 156 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRIML2Q8N7C3 387 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 FAM86B1Q8N7N1 296 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 TTC29Q8NA56 475 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 INO80EQ8NBZ0 244 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR2T33Q8NG76 320 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR2A12Q8NGT7 310 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR5K2Q8NHB8 316 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 NPRL2Q8WTW4 380 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 CHCHD10Q8WYQ3 142 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 FRAT1Q92837 279 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ARL5BQ96KC2 179 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 COL21A1Q96P44 957 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 CTRCQ99895 268 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 KCNS3Q9BQ31 491 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 TMEM246Q9BRR3 403 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 SYT11Q9BT88 431 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 RNF126Q9BV68 326 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 FGFBP2Q9BYJ0 223 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 CHIAQ9BZP6 476 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 UCK2Q9BZX2 261 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 CHMP4BQ9H444 224 aaKnown RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 RNF41Q9H4P4 317 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 KIR3DX1Q9H7L2 352 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 FOLH1BQ9HBA9 442 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 TREM1Q9NP99 234 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 KCNJ16Q9NPI9 418 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 SCRT2Q9NQ03 307 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 NANSQ9NR45 359 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 GIN1Q9NXP7 522 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ABCD2Q9UBJ2 740 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 LGALS13Q9UHV8 139 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 MGAT4AQ9UM21 535 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 UBQLN1Q9UMX0 589 aaKnown RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 SCML1Q9UN30 329 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF835Q9Y2P0 537 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 KCNIP3Q9Y2W7 256 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 CSAG2Q9Y5P2 127 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 MYH9P35579 1960 aaKnown RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 MYH10P35580 1976 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 DNAH11Q96DT5 4516 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ANAPC1Q9H1A4 1944 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGKV1D-8A0A087WSZ0 117 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGHV7-81A0A0B4J1V7 117 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 FAM231BA6NCW3 169 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 VSTM2BA6NLU5 285 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 LRRIQ3A6PVS8 624 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 G3V3Y1 287 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 RNASEK-C17orf49H0YIS7 233 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 K7ERI5 159 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 WWP2O00308 870 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 SIVA1O15304 175 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 UGT1A9O60656 530 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 CLDN11O75508 207 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 CDK14O94921 469 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 SCELO95171 688 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 FARS2O95363 451 aaKnown RBP1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 BRI3O95415 125 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 RENP00797 406 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 CST4P01036 141 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGLV2-11P01706 119 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 LAMP1P11279 417 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 HPGDP15428 266 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 CCNOP22674 350 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 AK4P27144 223 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 LCN1P31025 176 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 ACVR1BP36896 505 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 UGT2B15P54855 530 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 PKNOX1P55347 436 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 SNRPD1P62314 119 aaKnown RBP1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 RPL32P62910 135 aaKnown RBP1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 CTAG1AP78358 180 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 LCN2P80188 198 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLAMF1Q13291 335 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 ARL6IP1Q15041 203 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZBTB6Q15916 424 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 IZUMO4Q1ZYL8 232 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 UTF1Q5T230 341 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 GPR157Q5UAW9 335 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 BSPRYQ5W0U4 402 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 SPECC1LQ69YQ0 1117 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR5M10Q6IEU7 315 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 FAAP20Q6NZ36 180 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 PRMT9Q6P2P2 845 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRIM40Q6P9F5 258 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF836Q6ZNA1 936 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF600Q6ZNG1 722 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 PID1Q7Z2X4 250 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR2W3Q7Z3T1 314 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 PEX26Q7Z412 305 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 SNX20Q7Z614 316 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 LHFPL3Q86UP9 236 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 RBM45Q8IUH3 476 aaKnown RBP1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 BBS7Q8IWZ6 715 aa1.87□□□□□ -2.11
CKS1BP2-201ENST00000497342 PDIK1LQ8N165 341 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms