RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CANT1Q8WVQ1 401 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 IP6K3Q96PC2 410 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 OR52E6Q96RD3 313 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 PCDHAC1Q9H158 963 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 LYRM4Q9HD34 91 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 PRTFDC1Q9NRG1 225 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 MYOTQ9UBF9 498 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 MARCOQ9UEW3 520 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-222ENST00000493919 C19orf25Q9UFG5 118 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-222ENST00000493919 TMED3Q9Y3Q3 217 aa10.35□□□□□ -0.75
BRCA1-222ENST00000493919 SPENQ96T58 3664 aaKnown RBP10.35□□□□□ -0.75
BRCA1-222ENST00000493919 KALRNO60229 2985 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 A0A0A6YYD5 115 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 IQCMA0A1B0GVH7 501 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 SEMA7AO75326 666 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 UCHL1P09936 223 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 OR10J4P0C629 311 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF35P13682 527 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 RAG2P55895 527 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 ERVFRD-1P60508 538 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 SLC35A2P78381 396 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 RAB35Q15286 201 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 HACD2Q6Y1H2 254 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 FUNDC1Q8IVP5 155 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 OR11G2Q8NGC1 345 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 OR10AD1Q8NGE0 317 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 APOBEC4Q8WW27 367 aaKnown RBP10.34□□□□□ -0.75
BRCA1-222ENST00000493919 HRASLS5Q96KN8 279 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 ASPNQ9BXN1 380 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 EBPLQ9BY08 206 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 BARX1Q9HBU1 254 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF160Q9HCG1 818 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 CNIH4Q9P003 139 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 PACSIN3Q9UKS6 424 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 STRAPQ9Y3F4 350 aaKnown RBP10.34□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF337Q9Y3M9 751 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 CMAHPQ9Y471 501 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 DNAJC15Q9Y5T4 150 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 CHD6Q8TD26 2715 aa10.34□□□□□ -0.75
BRCA1-222ENST00000493919 NSG1A0A0A6YYJ2 146 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 TRBV7-9A0A0J9YWB2 115 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 SMCO3A2RU48 225 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 PIP5K1BO14986 540 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 PCDH7O60245 1069 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 WDR1O75083 606 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 LDB3O75112 727 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 SIX6O95475 246 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 TCRBP04435 133 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 ITGB2P05107 769 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 BCHEP06276 602 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 SFTPBP07988 381 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 FAM87AP0C7U9 286 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 LINC00032P0C843 101 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 COX6A1P12074 109 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 IL2RGP31785 369 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 GPR12P47775 334 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 NPBWR1P48145 328 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 CCL11P51671 97 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 RRADP55042 308 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 IL13RA1P78552 427 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 PITPNAQ00169 270 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 ID2Q02363 134 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 CD47Q08722 323 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 SPIN4Q56A73 249 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 NKAPLQ5M9Q1 402 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 GCNT6Q5T4J0 391 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 MOB3CQ70IA8 216 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 CALHM1Q8IU99 346 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 JAGN1Q8N5M9 183 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 PNLDC1Q8NA58 520 aaKnown RBP10.33□□□□□ -0.76
BRCA1-222ENST00000493919 KTI12Q96EK9 354 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-222ENST00000493919 NICN1Q9BSH3 213 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 OR51J1Q9H342 316 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 UBE2J1Q9Y385 318 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-222ENST00000493919 TRAV26-1A0A087WT03 109 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 TRAV39A0A0B4J263 110 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 GLOD5A6NK44 160 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 F8WDY8 70 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 HRKO00198 91 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 PPP1R2P9O14990 202 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 SCGB2A1O75556 95 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 AIFM1O95831 613 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 GCGP01275 180 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 GGT1P19440 569 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 OR4D2P58180 307 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 CYP51A1Q16850 503 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 NKPD1Q17RQ9 610 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 TMEM241Q24JQ0 296 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 COX19Q49B96 90 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF691Q5VV52 312 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 FAM71E1Q6IPT2 247 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 DNM1P34Q6PK57 102 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 TMEM205Q6UW68 189 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 EPGNQ6UW88 154 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 ALKAL2Q6UX46 152 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 FAM131AQ6UXB0 335 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 CPEB2Q7Z5Q1 589 aaKnown RBP10.33□□□□□ -0.76
BRCA1-222ENST00000493919 ANKRD37Q7Z713 158 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF595Q8IYB9 648 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 SLC34A3Q8N130 599 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms