RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CRLF1O75462 422 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 CBR3O75828 277 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 TRAPPC6AO75865 159 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 HOXC4P09017 264 aaPredicted RBP3.27□□□□□ -1.89
GTF3A-208ENST00000493903 TDGF1P13385 188 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 USF1P22415 310 aaPredicted RBP3.27□□□□□ -1.89
GTF3A-208ENST00000493903 CSNK1A1P48729 337 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 TDGF1P3P51864 188 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 FGF8P55075 233 aaPredicted RBP3.27□□□□□ -1.89
GTF3A-208ENST00000493903 AP1S2P56377 157 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 NSDHLQ15738 373 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 TNXAQ16473 311 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 LRRC10Q5BKY1 277 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 DUPD1Q68J44 220 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 ZNF470Q6ECI4 717 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 LCN12Q6JVE5 192 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 APOBEC3HQ6NTF7 200 aaKnown RBP3.27□□□□□ -1.89
GTF3A-208ENST00000493903 TEX43Q6ZNM6 134 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 TMEM179BQ7Z7N9 219 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 OAFQ86UD1 273 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 OR6Q1Q8NGQ2 317 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 OR10J6PQ8NGY7 276 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 NEIL3Q8TAT5 605 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 FAM3DQ96BQ1 224 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 LLPHQ9BRT6 129 aaKnown RBP3.27□□□□□ -1.89
GTF3A-208ENST00000493903 BBS2Q9BXC9 721 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 DEFB126Q9BYW3 111 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 FRMD8P1Q9BZ68 369 aaPredicted RBP3.27□□□□□ -1.89
GTF3A-208ENST00000493903 CCL28Q9NRJ3 127 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 ZNF275Q9NSD4 429 aaPredicted RBP3.27□□□□□ -1.89
GTF3A-208ENST00000493903 SLC39A1Q9NY26 324 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 VAPAQ9P0L0 249 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 ZNF629Q9UEG4 869 aaPredicted RBP3.27□□□□□ -1.89
GTF3A-208ENST00000493903 ITGB4P16144 1822 aa3.27□□□□□ -1.89
GTF3A-208ENST00000493903 COL5A3P25940 1745 aaPredicted RBP3.27□□□□□ -1.89
GTF3A-208ENST00000493903 CEMIPQ8WUJ3 1361 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 MROH7Q68CQ1 1323 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 PCDH11XQ9BZA7 1347 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 A0A0J9YXY3 114 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 A0A1B0GW15 77 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 ANKRD20A5PA0PJZ0 165 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 TRPC5OSA6NMA1 111 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 HIDE1A8MVS5 230 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 ANKRD65E5RJM6 399 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 PEX7O00628 323 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 FAM189A1O60320 539 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 SCN2BO60939 215 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 ALOX12BO75342 701 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 SC5DO75845 299 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 RAB3DO95716 219 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 HSPB1P04792 205 aaKnown RBP3.26□□□□□ -1.89
GTF3A-208ENST00000493903 OR8U9P0C7N5 309 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 P0C879 139 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 CAPN2P17655 700 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 GGT1P19440 569 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 RAB3BP20337 219 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 WARSP23381 471 aaKnown RBP3.26□□□□□ -1.89
GTF3A-208ENST00000493903 GABRR1P24046 479 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 CCNE1P24864 410 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 LOXP28300 417 aaPredicted RBP3.26□□□□□ -1.89
GTF3A-208ENST00000493903 MAS1LP35410 378 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 PCK1P35558 622 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 CRATP43155 626 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 RND2P52198 227 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 VSNL1P62760 191 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 TCP10Q12799 353 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 SGCAQ16586 387 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 KYAT1Q16773 422 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 C15orf32Q32M92 178 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 CHRFAM7AQ494W8 412 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 THEM4Q5T1C6 240 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 CPTPQ5TA50 214 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 TRMT10CQ7L0Y3 403 aaKnown RBP3.26□□□□□ -1.89
GTF3A-208ENST00000493903 ABHD12BQ7Z5M8 362 aaPredicted RBP3.26□□□□□ -1.89
GTF3A-208ENST00000493903 FAM9CQ8IZT9 166 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 TMEM61Q8N0U2 210 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 CBR4Q8N4T8 237 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 MREGQ8N565 214 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 CHST4Q8NCG5 386 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 OR8U1Q8NH10 309 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 RHOXF1Q8NHV9 184 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 AURKBQ96GD4 344 aaPredicted RBP3.26□□□□□ -1.89
GTF3A-208ENST00000493903 SCGB3A2Q96PL1 93 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 UTP23Q9BRU9 249 aaKnown RBP3.26□□□□□ -1.89
GTF3A-208ENST00000493903 GABARAPL3Q9BY60 117 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 HDHD2Q9H0R4 259 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 OR2S2Q9NQN1 319 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 NECAP2Q9NVZ3 263 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 RMND1Q9NWS8 449 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 VNN3Q9NY84 501 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 TMEM9Q9P0T7 183 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 CLEC2DQ9UHP7 191 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 MRM2Q9UI43 246 aaKnown RBP3.26□□□□□ -1.89
GTF3A-208ENST00000493903 ENPP5Q9UJA9 477 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 MOKQ9UQ07 419 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 TIAM2Q8IVF5 1701 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 ADAMTS7Q9UKP4 1686 aa3.26□□□□□ -1.89
GTF3A-208ENST00000493903 USP42Q9H9J4 1324 aaKnown RBP3.25□□□□□ -1.89
GTF3A-208ENST00000493903 ANKRD26Q9UPS8 1709 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 SBF1O95248 1867 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms