RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 HIST1H1CP16403 213 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ZNF19P17023 458 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SPI1P17947 270 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ELK1P19419 428 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RAB3BP20337 219 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 CNR1P21554 472 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 MPZP25189 248 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 TACR3P29371 465 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ERP29P30040 261 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SLC6A1P30531 599 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 APOBEC3AP31941 199 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 OTX1P32242 354 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 BTCP35070 178 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RCVRNP35243 200 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 TALDO1P37837 337 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 CAPZBP47756 277 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 NR0B1P51843 470 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SLC25A1P53007 311 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RAG2P55895 527 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 MAZP56270 477 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 OR12D2P58182 307 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 MLF1P58340 268 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 AP3S2P59780 193 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RPS7P62081 194 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RPS11P62280 158 aaKnown RBP eCLIP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SNRPEP62304 92 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ACTA2P62736 377 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ACTG2P63267 376 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 PAX5Q02548 391 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SLC3A1Q07837 685 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 STX4Q12846 297 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 C1orf61Q13536 156 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SERTAD2Q14140 314 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 MELKQ14680 651 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 HLXQ14774 488 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 PON3Q15166 354 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 TBR1Q16650 682 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 NKPD1Q17RQ9 610 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RNF151Q2KHN1 245 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 DEFB110Q30KQ9 67 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 CCDC58Q4VC31 144 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ACSM3Q53FZ2 586 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 YIF1BQ5BJH7 314 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ZNF542PQ5EBM4 170 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 C6orf226Q5I0X4 101 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ZNF684Q5T5D7 378 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 IDNKQ5T6J7 187 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 FAM27D1Q5T7N8 215 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 LINC01590Q5TEZ4 76 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 FAM69BQ5VUD6 431 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RPL22L1Q6P5R6 122 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 BAIAP2L2Q6UXY1 529 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ETV3LQ6ZN32 361 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SSX6Q7RTT6 188 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ABHD12BQ7Z5M8 362 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 CEACAM19Q7Z692 300 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ATG4DQ86TL0 474 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 C17orf82Q86X59 251 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ADGRG3Q86Y34 549 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SLC35F2Q8IXU6 374 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ZNF614Q8N883 585 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 Q8N9G6 341 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 EXD3Q8N9H8 876 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 DTX3Q8N9I9 347 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 LRRC75AQ8NAA5 344 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 FAM98AQ8NCA5 519 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 NPEPL1Q8NDH3 523 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SDR9C7Q8NEX9 313 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 OR4M1Q8NGD0 313 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 OR4N2Q8NGD1 307 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 OR52E2Q8NGJ4 325 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 OR5M1Q8NGP8 315 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 OR2AJ1Q8NGZ0 328 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 C16orf52Q8NHV5 167 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 NRGNQ92686 78 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 GHSRQ92847 366 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 DAZLQ92904 295 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 CREB3L1Q96BA8 519 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 UPRTQ96BW1 309 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SMIM19Q96E16 107 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ZMYND19Q96E35 227 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 PELI1Q96FA3 418 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 MRPL48Q96GC5 212 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 GPR137Q96N19 417 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 ERMAPQ96PL5 475 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 CNN2Q99439 309 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 WACQ9BTA9 647 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 LRRC61Q9BV99 259 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RBM24Q9BX46 236 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 LRRN3Q9H3W5 708 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RIMS4Q9H426 269 aaPredicted RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SLA2Q9H6Q3 261 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 CDH20Q9HBT6 801 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 EXOSC3Q9NQT5 275 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 PIPOXQ9P0Z9 390 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 RPS6KB2Q9UBS0 482 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 EPHA6Q9UF33 1036 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 FBXL4Q9UKA2 621 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 SPATA2Q9UM82 520 aa3.35□□□□□ -1.87
ATPAF1-206ENST00000492233 MOKQ9UQ07 419 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms