RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PRPF19Q9UMS4 504 aaKnown RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 TSSC4Q9Y5U2 329 aaPredicted RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 NPIPB13A6NJU9 1138 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 NPIPB4C9JG80 1138 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 CLIC1O00299 241 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 SPAG7O75391 227 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 LHBP01229 141 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 IL6P05231 212 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 BPGMP07738 259 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 SELLP14151 372 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 AMY2BP19961 511 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 CA6P23280 308 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 CDK6Q00534 326 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 CKAP4Q07065 602 aaKnown RBP7.36□□□□□ -1.23
SSBP1-212ENST00000489378 FADDQ13158 208 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 OR8G1Q15617 311 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 PLA1AQ53H76 456 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 C6orf10Q5SRN2 563 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 GCNT6Q5T4J0 391 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 SMYD1Q8NB12 490 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 TCP10LQ8TDR4 215 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 ADAMTS16Q8TE57 1224 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 H1FXQ92522 213 aaKnown RBP7.36□□□□□ -1.23
SSBP1-212ENST00000489378 ANAPC16Q96DE5 110 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 SEH1LQ96EE3 360 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 ITCHQ96J02 903 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 PRSS27Q9BQR3 290 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 HCAR1Q9BXC0 346 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 C20orf27Q9GZN8 174 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 METTL8Q9H825 291 aaKnown RBP7.36□□□□□ -1.23
SSBP1-212ENST00000489378 TCF19Q9Y242 345 aa7.36□□□□□ -1.23
SSBP1-212ENST00000489378 SF3B6Q9Y3B4 125 aaKnown RBP7.36□□□□□ -1.23
SSBP1-212ENST00000489378 A6NDX4 124 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 PRORSD1PA6NEY8 169 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 NKX6-3A6NJ46 265 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 A6NLC8 198 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 H7C1C5 153 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 M0R1W7 72 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 ACOT8O14734 319 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 SLC22A3O75751 556 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 TSPAN19P0C672 248 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 HOXB9P17482 250 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 RPL27P61353 136 aaKnown RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 LCN6P62502 163 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 GK2Q14410 553 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 TM4SF20Q53R12 229 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 KHDC1LQ5JSQ8 128 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 C10orf99Q6UWK7 81 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 UNQ9370/PRO34162Q6UXP9 181 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 ARMC8Q8IUR7 673 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 DYNAPQ8N1N2 210 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 GPR32P1Q8NGA4 272 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 LRRC8CQ8TDW0 803 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 WACQ9BTA9 647 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 PAIP1Q9H074 479 aaKnown RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 hCG_1807616A0A1W2PRN6 198 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 TRAPPC13A5PLN9 417 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 RER1O15258 196 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 NDUFB3O43676 98 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 IGF2P01344 180 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 MT-ND1P03886 318 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 GRPP07492 148 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 HNRNPCP07910 306 aaKnown RBP eCLIP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 CHATP28329 748 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 AQP6Q13520 282 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 PCK2Q16822 640 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 DUSP7Q16829 419 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 RSPO1Q2MKA7 263 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 COLCA1Q6ZS62 124 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 SBSPONQ8IVN8 264 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 FNDC8Q8TC99 324 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 SPRYD4Q8WW59 207 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 ACOT11Q8WXI4 607 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 ANP32BQ92688 251 aaKnown RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 SGTBQ96EQ0 304 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 DUS3LQ96G46 650 aaKnown RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 SORT1Q99523 831 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 ADAT1Q9BUB4 502 aaKnown RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 MCRIP2Q9BUT9 160 aaKnown RBP7.35□□□□□ -1.23
SSBP1-212ENST00000489378 RMND5AQ9H871 391 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 SLC25A37Q9NYZ2 338 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 ADA2Q9NZK5 511 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 NDUFAF1Q9Y375 327 aa7.35□□□□□ -1.23
SSBP1-212ENST00000489378 KIAA1109Q2LD37 5005 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 VGLL3A8MV65 326 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 F2RL2O00254 374 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 SDHDO14521 159 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 RAMP3O60896 148 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 SERPINB7O75635 380 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 TFF1P04155 84 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 TGM4P49221 684 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 RPL14P50914 215 aaKnown RBP7.34□□□□□ -1.23
SSBP1-212ENST00000489378 ABCE1P61221 599 aaKnown RBP7.34□□□□□ -1.23
SSBP1-212ENST00000489378 IL5RAQ01344 420 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 ECH1Q13011 328 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 SCARB2Q14108 478 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 MICBQ29980 383 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 ALG10Q5BKT4 473 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms