RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 FFAR1O14842 300 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 PPP1R3DO95685 299 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 IFNA14P01570 189 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 GRPP07492 148 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 CD28P10747 220 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 MUC1P15941 1255 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-213ENST00000476777 ANOS1P23352 680 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 GPR4P46093 362 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 YAP1P46937 504 aaKnown RBP9.26□□□□□ -0.93
BRCA1-213ENST00000476777 MAGOHP61326 146 aaKnown RBP9.26□□□□□ -0.93
BRCA1-213ENST00000476777 ACSM1Q08AH1 577 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 TRAP1Q12931 704 aaKnown RBP9.26□□□□□ -0.93
BRCA1-213ENST00000476777 ECH1Q13011 328 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 RABL3Q5HYI8 236 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 WDR38Q5JTN6 314 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 GPR139Q6DWJ6 353 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 PGM2L1Q6PCE3 622 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 TBPL2Q6SJ96 375 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 TMPRSS11FQ6ZWK6 438 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 MRPL21Q7Z2W9 205 aaKnown RBP9.26□□□□□ -0.93
BRCA1-213ENST00000476777 NDUFA11Q86Y39 141 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 RNF113BQ8IZP6 322 aaKnown RBP9.26□□□□□ -0.93
BRCA1-213ENST00000476777 FAM216BQ8N7L0 139 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 C8orf46Q8TAG6 207 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 CLPTM1LQ96KA5 538 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 TSSK2Q96PF2 358 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 PITX2Q99697 317 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 DCTN5Q9BTE1 182 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 FNDC11Q9BVV2 318 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 PNRC2Q9NPJ4 139 aaKnown RBP9.26□□□□□ -0.93
BRCA1-213ENST00000476777 NRIP3Q9NQ35 241 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 MRPL15Q9P015 296 aaKnown RBP9.26□□□□□ -0.93
BRCA1-213ENST00000476777 PRPF19Q9UMS4 504 aaKnown RBP9.26□□□□□ -0.93
BRCA1-213ENST00000476777 SNX13Q9Y5W8 968 aa9.26□□□□□ -0.93
BRCA1-213ENST00000476777 A0A087WUU8 490 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-213ENST00000476777 J3KTA2 159 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 SOCS2O14508 198 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 PTP4A3O75365 173 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 IGLL1P15814 213 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 AMY2BP19961 511 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 IFNA8P32881 189 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 MDH1P40925 334 aaKnown RBP9.25□□□□□ -0.93
BRCA1-213ENST00000476777 CDKN2AP42771 156 aaKnown RBP9.25□□□□□ -0.93
BRCA1-213ENST00000476777 TGM4P49221 684 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 CENPAP49450 140 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 ZNF92Q03936 586 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 IKZF1Q13422 519 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 TRAM2Q15035 370 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 PCK2Q16822 640 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 MICBQ29980 383 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 ZBTB37Q5TC79 503 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 SLC18B1Q6NT16 456 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 ZNF730Q6ZMV8 503 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 MBOAT2Q6ZWT7 520 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 TSEN54Q7Z6J9 526 aaKnown RBP9.25□□□□□ -0.93
BRCA1-213ENST00000476777 ADCK1Q86TW2 530 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 LINC00346Q8IVM7 164 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 C11orf53Q8IXP5 236 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 WFDC9Q8NEX5 89 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 WIPF2Q8TF74 440 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-213ENST00000476777 TSPEARQ8WU66 669 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 RORBQ92753 470 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 TPD52L3Q96J77 140 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 GPX7Q96SL4 187 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-213ENST00000476777 ATF6BQ99941 703 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 NPFFR1Q9GZQ6 430 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 FAM234AQ9H0X4 552 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 RAB18Q9NP72 206 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 SERTAD4Q9NUC0 356 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 ADA2Q9NZK5 511 aa9.25□□□□□ -0.93
BRCA1-213ENST00000476777 IGLV1-36A0A0B4J1U3 117 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 GGT3PA6NGU5 568 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 ACOT8O14734 319 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 NDUFB3O43676 98 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 CHST1O43916 411 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 NDUFB2O95178 105 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 TXNDC12O95881 172 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 CRABP1P29762 137 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 GGT2P36268 569 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 SELENOWP63302 87 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 CYLC2Q14093 348 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-213ENST00000476777 AANATQ16613 207 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 LRRC75BQ2VPJ9 315 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 SNAI3Q3KNW1 292 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 LRRC23Q53EV4 343 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-213ENST00000476777 NCR3LG1Q68D85 454 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 HCP5Q6MZN7 132 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 SLC36A1Q7Z2H8 476 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 SLC26A10Q8NG04 563 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 OR8J3Q8NGG0 315 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 OR51G2Q8NGK0 314 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 OR2AE1Q8NHA4 323 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 SLC7A13Q8TCU3 470 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 LRRC29Q8WV35 223 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 TLCD1Q96CP7 247 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 SEH1LQ96EE3 360 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 CITED2Q99967 270 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-213ENST00000476777 PARD6BQ9BYG5 372 aa9.24□□□□□ -0.93
BRCA1-213ENST00000476777 NDEL1Q9GZM8 345 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms