RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ESPL1Q14674 2120 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 PRRC2CQ9Y520 2896 aaKnown RBP8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 IGHV1-18A0A0C4DH31 117 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 TRBV5-5A0A0J9YX44 114 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 A0A1W2PPW3 197 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 MEGF11A6BM72 1044 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 TUBAL3A6NHL2 446 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 DHRS7CA6NNS2 312 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 ZG16O60844 167 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 HCKP08631 526 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 CELA3BP08861 270 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 UCHL1P09936 223 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 FAM157BP0CG42 384 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 SRMP19623 302 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 RAB3AP20336 220 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 PCSK6P29122 969 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 S100A5P33763 92 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 SDC2P34741 201 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 THBS4P35443 961 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 PPP1CBP62140 327 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 HNRNPA0Q13151 305 aaKnown RBP8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 SPCS2Q15005 226 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 CNN3Q15417 329 aaKnown RBP8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF718Q3SXZ3 478 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 FOXB2Q5VYV0 432 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 GLT8D1Q68CQ7 371 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 MZT2AQ6P582 158 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 NAA40Q86UY6 237 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF584Q8IVC4 421 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 NKAIN3Q8N8D7 197 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 PNLDC1Q8NA58 520 aaKnown RBP8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 CSNK2A3Q8NEV1 391 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 OR2AE1Q8NHA4 323 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 PPP1R14AQ96A00 147 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 FGGYQ96C11 551 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 DACH2Q96NX9 599 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 TECTBQ96PL2 329 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 HIST1H2AAQ96QV6 131 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 PLGRKTQ9HBL7 147 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF275Q9NSD4 429 aaPredicted RBP8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 CCDC59Q9P031 241 aaKnown RBP8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 CRNNQ9UBG3 495 aaPredicted RBP8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 KCNN3Q9UGI6 736 aa8.9□□□□□ -0.98
PRPF38A-202ENST00000474048 MYO7BQ6PIF6 2116 aa8.9□□□□□ -0.99
PRPF38A-202ENST00000474048 USP24Q9UPU5 2620 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 ATRXP46100 2492 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 TRAV1-2A0A0B4J238 106 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 IGHV2OR16-5A0A0B4J2B6 119 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF816-ZNF321PA0A0X1KG74 233 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 LOC390937A0A1W2PQ73 354 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 ANKRD30BLA7E2S9 258 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 SMPD2O60906 423 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 IGLV1-44P01699 117 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 MAS1P04201 325 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 FSTP19883 344 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 CCL1P22362 96 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 DDOSTP39656 456 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 UCP2P55851 309 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 NAAAQ02083 359 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 SNTB2Q13425 540 aaKnown RBP8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 INSL4Q14641 139 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 KRTAP27-1Q3LI81 207 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 CEP78Q5JTW2 689 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 RGS7BPQ6MZT1 257 aaPredicted RBP8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 SLC22A25Q6T423 547 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 TMEM91Q6ZNR0 172 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 OR51A4Q8NGJ6 313 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 OR10AC1Q8NH08 325 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 MCFD2Q8NI22 146 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF671Q8TAW3 534 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 RGP1Q92546 391 aaPredicted RBP8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 CEP19Q96LK0 163 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 BBC3Q96PG8 261 aaPredicted RBP8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 GPER1Q99527 375 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 S100A13Q99584 98 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 PAPOLGQ9BWT3 736 aaKnown RBP8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 C6orf62Q9GZU0 229 aaPredicted RBP8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 ZCCHC4Q9H5U6 513 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 RNF167Q9H6Y7 350 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 ADAM30Q9UKF2 790 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 FOXJ3Q9UPW0 622 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 SLC7A11Q9UPY5 501 aa8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 NOP16Q9Y3C1 178 aaKnown RBP8.89□□□□□ -0.99
PRPF38A-202ENST00000474048 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 ANKRD61A6NGH8 418 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 RGS5O15539 181 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 SULT1B1O43704 296 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 TIMM8AO60220 97 aaPredicted RBP8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 SC5DO75845 299 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 FAHP16930 419 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF182P17025 639 aaPredicted RBP8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 CD40P25942 277 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 BDKRB2P30411 391 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 CCKARP32238 428 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 TGFBR1P36897 503 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 GSK3AP49840 483 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 RPS11P62280 158 aaKnown RBP eCLIP8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF92Q03936 586 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 HGFACQ04756 655 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 RSPO1Q2MKA7 263 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms