RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 C10orf128Q5T292 105 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 LIPKQ5VXJ0 399 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 SLC18B1Q6NT16 456 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 PLEKHG7Q6ZR37 379 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 DPY19L4Q7Z388 723 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 LINC00346Q8IVM7 164 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 TUSC5Q8IXB3 177 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 SLC7A5P1Q8MH63 180 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 GCNT2Q8N0V5 402 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 SPERTQ8NA61 448 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 ZNF485Q8NCK3 441 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 OTOSQ8NHW6 89 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 RAB2BQ8WUD1 216 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 C11orf40Q8WZ69 217 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 RPL3LQ92901 407 aaKnown RBP5.55□□□□□ -1.52
HDAC1-205ENST00000472928 MCHR2Q969V1 340 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 C12orf43Q96C57 262 aaKnown RBP5.55□□□□□ -1.52
HDAC1-205ENST00000472928 INTS12Q96CB8 462 aaKnown RBP5.55□□□□□ -1.52
HDAC1-205ENST00000472928 ZFP3Q96NJ6 502 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 AMELYQ99218 206 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 MNTQ99583 582 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 REG4Q9BYZ8 158 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 SLCO5A1Q9H2Y9 848 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 SEC61A2Q9H9S3 476 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 BCO1Q9HAY6 547 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 ISYNA1Q9NPH2 558 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 POLE4Q9NR33 117 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 NDUFB11Q9NX14 153 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 NDRG3Q9UGV2 375 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 PRELID1Q9Y255 219 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 GRIP1Q9Y3R0 1128 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 TMEM14AQ9Y6G1 99 aa5.55□□□□□ -1.52
HDAC1-205ENST00000472928 LOC105371267A0A1B0GV96 52 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 METTL15A6NJ78 407 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ZNF587BE7ETH6 402 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 E9PI62 339 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 KCNAB3O43448 404 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 AIREO43918 545 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 MRPL33O75394 65 aaKnown RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 MTRF1O75570 445 aaKnown RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 UPK3AO75631 287 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 RPP14O95059 124 aaKnown RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 IGHV3-9P01782 118 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 KRT8P05787 483 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 YES1P07947 543 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 B4GALT1P15291 398 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ALOX5APP20292 161 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 M6PRP20645 277 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 EDNRAP25101 427 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 GABRA5P31644 462 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 PSMB10P40306 273 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 CAPZA2P47755 286 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ZNF133P52736 654 aaPredicted RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 GBX2P52951 348 aaPredicted RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 TMBIM6P55061 237 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 SIRPAP78324 504 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 BDH1Q02338 343 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 CDK5R1Q15078 307 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 SF3B4Q15427 424 aaKnown RBP eCLIP5.54□□□□□ -1.527e-7■■■■■ 27.1
HDAC1-205ENST00000472928 SGCAQ16586 387 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 CLEC12BQ2HXU8 276 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 CEACAM16Q2WEN9 425 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 TRIM16LQ309B1 348 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 TIMM50Q3ZCQ8 353 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 C6orf183Q5T699 404 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 SIGIRRQ6IA17 410 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 OR7E24Q6IFN5 339 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 CORO6Q6QEF8 472 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ZNF474Q6S9Z5 364 aaPredicted RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ARL9Q6T311 187 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 LRRN1Q6UXK5 716 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 FOXL2NBQ6ZUU3 175 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 LINGO2Q7L985 606 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 NUFIP2Q7Z417 695 aaKnown RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 DCXRQ7Z4W1 244 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ZNF100Q8IYN0 542 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 SYS1Q8N2H4 156 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 YIPF7Q8N8F6 280 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 OR52N5Q8NH56 324 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ANGPTL6Q8NI99 470 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 NDNFQ8TB73 568 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 THEM6Q8WUY1 208 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ASB17Q8WXJ9 295 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 NABP1Q96AH0 204 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 APH1AQ96BI3 265 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 PELI1Q96FA3 418 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 GMPPAQ96IJ6 420 aaPredicted RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 BCL7BQ9BQE9 202 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 CHCHD6Q9BRQ6 235 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 DCUN1D5Q9BTE7 237 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ABHD6Q9BV23 337 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 TMED9Q9BVK6 235 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 OR51E2Q9H255 320 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 NELFAQ9H3P2 528 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 PIGMQ9H3S5 423 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 RNF122Q9H9V4 155 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 CRLF2Q9HC73 371 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 GPR35Q9HC97 309 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 EXOSC4Q9NPD3 245 aaKnown RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 ASH2LQ9UBL3 628 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms