RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 KATNB1Q9BVA0 655 aa5.37□□□□□ -1.55
PTCD3-208ENST00000469585 GHITMQ9H3K2 345 aa5.37□□□□□ -1.55
PTCD3-208ENST00000469585 RANGRFQ9HD47 186 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-208ENST00000469585 MEPEQ9NQ76 525 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-208ENST00000469585 TAS2R5Q9NYW4 299 aa5.37□□□□□ -1.55
PTCD3-208ENST00000469585 DNAJB9Q9UBS3 223 aa5.37□□□□□ -1.55
PTCD3-208ENST00000469585 KLHL21Q9UJP4 597 aa5.37□□□□□ -1.55
PTCD3-208ENST00000469585 FKBP7Q9Y680 259 aa5.37□□□□□ -1.55
PTCD3-208ENST00000469585 U3KQV3 271 aa5.37□□□□□ -1.55
PTCD3-208ENST00000469585 USP9YO00507 2555 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 USP9XQ93008 2570 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 A0A1W2PR80 420 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ARRDC5A6NEK1 342 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 LRRN3E7EW58 273 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 IMPA2O14732 288 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 KHDRBS3O75525 346 aaKnown RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 UPK3AO75631 287 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 TRMUO75648 421 aaKnown RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 IGHMP01871 453 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 HMGN1P05114 100 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 PGA4P0DJD7 388 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 PGA3P0DJD8 388 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 HLA-DOBP13765 273 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 CBR1P16152 277 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ZNF23P17027 643 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 KLK2P20151 261 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 MSR1P21757 451 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 CCNOP22674 350 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 LMO1P25800 156 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 GCH1P30793 250 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 CCKARP32238 428 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 RAD52P43351 418 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 GDI2P50395 445 aaKnown RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 IDH3GP51553 393 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 P2RY4P51582 365 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ART1P52961 327 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 CRYBA2P53672 197 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ERVK-25P63136 954 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 MYBPC1Q00872 1141 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 LGALS3BPQ08380 585 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 SCRN3Q0VDG4 424 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 RAB35Q15286 201 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 TAF13Q15543 124 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ZNF672Q499Z4 452 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 HIKESHIQ53FT3 197 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 NCMAPQ5T1S8 102 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 TBPL2Q6SJ96 375 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 GLDNQ6ZMI3 551 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 HIPK1Q86Z02 1210 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 FOXRED2Q8IWF2 684 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 TMEM123Q8N131 208 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 SVOPLQ8N434 492 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 LRRC18Q8N456 261 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 SLC22A24Q8N4F4 322 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ARIH2OSQ8N7S6 290 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ZIC4Q8N9L1 334 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 AQP11Q8NBQ7 271 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ACBD4Q8NC06 268 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ICA1LQ8NDH6 482 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 OR10G2Q8NGC3 310 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 OR2T4Q8NH00 348 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 MOSPD2Q8NHP6 518 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 SMAP2Q8WU79 429 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 SGCDQ92629 289 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ZNF524Q96C55 264 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 C7orf34Q96L11 122 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 CMTM3Q96MX0 182 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 TNFRSF13CQ96RJ3 184 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 MYCBPQ99417 103 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 DHRS9Q9BPW9 319 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 WFDC6Q9BQY6 131 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 OSBPL10Q9BXB5 764 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 C1QTNF6Q9BXI9 259 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 VCXQ9H320 206 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 OR52D1Q9H346 318 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 PPP1R3EQ9H7J1 279 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 SIAEQ9HAT2 523 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ELOVL3Q9HB03 270 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 DYNLRB1Q9NP97 96 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 TMEM38BQ9NVV0 291 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 PDP1Q9P0J1 537 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-208ENST00000469585 B3GAT1Q9P2W7 334 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 SEC14L4Q9UDX3 406 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 SLC7A8Q9UHI5 535 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 POMPQ9Y244 141 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 PLEKHA6Q9Y2H5 1048 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 AP4S1Q9Y587 144 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 TIMM10BQ9Y5J6 103 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 IER3IP1Q9Y5U9 82 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 SLC25A15Q9Y619 301 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 CDH10Q9Y6N8 788 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 PTPN13Q12923 2485 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 FLNCQ14315 2725 aa5.36□□□□□ -1.55
PTCD3-208ENST00000469585 ANKHD1Q8IWZ3 2542 aaKnown RBP5.35□□□□□ -1.55
PTCD3-208ENST00000469585 PKDREJQ9NTG1 2253 aa5.35□□□□□ -1.55
PTCD3-208ENST00000469585 MPDZO75970 2070 aa5.35□□□□□ -1.55
PTCD3-208ENST00000469585 TRBV4-1A0A0J9YWV2 114 aa5.35□□□□□ -1.55
PTCD3-208ENST00000469585 A0A1W2PPW3 197 aa5.35□□□□□ -1.55
PTCD3-208ENST00000469585 PLSCR5A0PG75 271 aa5.35□□□□□ -1.55
PTCD3-208ENST00000469585 PRSS37A4D1T9 235 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms