RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 GATAD2BQ8WXI9 593 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 ZNF799Q96GE5 643 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 DHRS1Q96LJ7 313 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 RBM4BQ9BQ04 359 aaKnown RBP10.13□□□□□ -0.79
HDAC3-204ENST00000469207 ADAT1Q9BUB4 502 aaKnown RBP10.13□□□□□ -0.79
HDAC3-204ENST00000469207 EGLN3Q9H6Z9 239 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 FN3KRPQ9HA64 309 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 MRGBPQ9NV56 204 aa10.13□□□□□ -0.79
HDAC3-204ENST00000469207 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 A0A1W2PRD5 423 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 A0A1W2PRF3 423 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 A0A1W2PRM7 423 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 OOEPA6NGQ2 149 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 DVL1O14640 695 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 ARPC3O15145 178 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 SLC22A2O15244 555 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 GPR137BO60478 399 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 GADD45GO95257 159 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 NOS3P29474 1203 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 SLC6A6P31641 620 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 IER3P46695 156 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 NPY4RP50391 375 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 BPIFB3P59826 476 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC3-204ENST00000469207 ECH1Q13011 328 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 SLC36A3Q495N2 470 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 METTL11BQ5VVY1 283 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 WDR86Q86TI4 376 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 C11orf53Q8IXP5 236 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 TBC1D15Q8TC07 691 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 DDOQ99489 341 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 CCL13Q99616 98 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 PKP2Q99959 881 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 ABCD2Q9UBJ2 740 aa10.12□□□□□ -0.79
HDAC3-204ENST00000469207 TRAV38-1A0A0B4J264 116 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 hCG_1807616A0A1W2PRN6 198 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 A6NLC8 198 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 M0QZ24 198 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 GMDSO60547 372 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 PTBP3O95758 552 aaKnown RBP10.11□□□□□ -0.79
HDAC3-204ENST00000469207 TSPAN15O95858 294 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 LHBP01229 141 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 TFF1P04155 84 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 LIPFP07098 398 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 ZNF823P16415 610 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 SPIBQ01892 262 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 KRT72Q14CN4 511 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 TAF9Q16594 264 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 OCLNQ16625 522 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 Q6ZSV7 163 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 DCXRQ7Z4W1 244 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 TMEM86BQ8N661 226 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 PNLDC1Q8NA58 520 aaKnown RBP10.11□□□□□ -0.79
HDAC3-204ENST00000469207 SCCPDHQ8NBX0 429 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 OR56B2PQ8NGI1 322 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 FAM110DQ8TAY7 271 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-204ENST00000469207 SSMEM1Q8WWF3 244 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 ST8SIA4Q92187 359 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 DYRK2Q92630 601 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 TRIM15Q9C019 465 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 MMP27Q9H306 513 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 CNTD2Q9H8S5 307 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 CENPMQ9NSP4 180 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 POMT1Q9Y6A1 747 aa10.11□□□□□ -0.79
HDAC3-204ENST00000469207 BHLHE40O14503 412 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 CLPXO76031 633 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 SEMG1P04279 462 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 GYPBP06028 91 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 AMY2BP19961 511 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 GSSP48637 474 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 PROK1P58294 105 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 PDCD1Q15116 288 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 HACD2Q6Y1H2 254 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 VMO1Q7Z5L0 202 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 PNKDQ8N490 385 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 ZNF511Q8NB15 262 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 OR5T2Q8NGG2 359 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 OR9Q1Q8NGQ5 310 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 SPTSSAQ969W0 71 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 PYURFQ96I23 114 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 KRCC1Q9NPI7 259 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-204ENST00000469207 SIRT7Q9NRC8 400 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 KIF17Q9P2E2 1029 aa10.1□□□□□ -0.79
HDAC3-204ENST00000469207 RPUSD1Q9UJJ7 312 aaKnown RBP10.1□□□□□ -0.79
HDAC3-204ENST00000469207 A0A0G2JK05 382 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 TIMM23O14925 209 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 CLUP10909 449 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 SELLP14151 372 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 RRM2P31350 389 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 OTX1P32242 354 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-204ENST00000469207 GMFBP60983 142 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 CSNK2BP67870 215 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 PPP1R8Q12972 351 aaKnown RBP10.09□□□□□ -0.79
HDAC3-204ENST00000469207 KCNJ8Q15842 424 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 TEX36Q5VZQ5 186 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 PGBD2Q6P3X8 592 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 FAM216BQ8N7L0 139 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 ZSCAN4Q8NAM6 433 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-204ENST00000469207 PROKR2Q8NFJ6 384 aa10.09□□□□□ -0.79
HDAC3-204ENST00000469207 OR8D4Q8NGM9 314 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms