RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 BBOF1Q8ND07 529 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 NOXO1Q8NFA2 376 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 CT45A3Q8NHU0 189 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 SEH1LQ96EE3 360 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 OR2A5Q96R48 311 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 SDHCQ99643 169 aaPredicted RBP3.16□□□□□ -1.9
LSM5-209ENST00000468872 UCK2Q9BZX2 261 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 SLC7A5P2Q9GIP4 190 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 ELOVL6Q9H5J4 265 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 NTN4Q9HB63 628 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 MRPS30Q9NP92 439 aaKnown RBP3.16□□□□□ -1.9
LSM5-209ENST00000468872 UVRAGQ9P2Y5 699 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 KLK12Q9UKR0 248 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 RAB26Q9ULW5 256 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 LMO7Q8WWI1 1683 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 ZNF609O15014 1411 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 PLXNA3P51805 1871 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 LOC400499M0QZD8 3231 aa3.15□□□□□ -1.9
LSM5-209ENST00000468872 GCC2Q8IWJ2 1684 aa3.15□□□□□ -1.9
LSM5-209ENST00000468872 ALS2Q96Q42 1657 aa3.15□□□□□ -1.9
LSM5-209ENST00000468872 IGLV3-16A0A075B6K0 115 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 KCNE1BA0A087WTH5 132 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 TRAV25A0A0B4J276 109 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 A0A1B0GVX0 72 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 LRRIQ4A6NIV6 560 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 AIREO43918 545 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 FLOT1O75955 427 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 AQP8O94778 261 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 CCNB2O95067 398 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 ARG1P05089 322 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 RETP07949 1114 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 UBTFL6P0CB48 400 aaPredicted RBP3.15□□□□□ -1.91
LSM5-209ENST00000468872 CEACAM3P40198 252 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 RPS9P46781 194 aaKnown RBP3.15□□□□□ -1.91
LSM5-209ENST00000468872 CSNK1A1P48729 337 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 IFT88Q13099 833 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 ERCC8Q13216 396 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 PON2Q15165 354 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 RGNQ15493 299 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 PSMD5Q16401 504 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 THEM4Q5T1C6 240 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 UBE2UQ5VVX9 321 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 PLET1Q6UQ28 207 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 COMMD1Q8N668 190 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 OR52E5Q8NH55 327 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 MICU1Q9BPX6 476 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 RPP21Q9H633 154 aaKnown RBP3.15□□□□□ -1.91
LSM5-209ENST00000468872 LYRM4Q9HD34 91 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 AGPAT4Q9NRZ5 378 aa3.15□□□□□ -1.91
LSM5-209ENST00000468872 C5P01031 1676 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 ITPR1Q14643 2758 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 TRPM3Q9HCF6 1732 aaPredicted RBP3.14□□□□□ -1.91
LSM5-209ENST00000468872 NCF1BA6NI72 391 aaPredicted RBP3.14□□□□□ -1.91
LSM5-209ENST00000468872 NCBP2LA6PVI3 153 aaKnown RBP3.14□□□□□ -1.91
LSM5-209ENST00000468872 NCF1CA8MVU1 366 aaPredicted RBP3.14□□□□□ -1.91
LSM5-209ENST00000468872 SUPT3HB4E1H0 165 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 H0YIV9 168 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 GOLGA8TH3BQL2 631 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 RAD51CO43502 376 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 BCHEP06276 602 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 CTRB1P17538 263 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 GGT1P19440 569 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 MAGP20916 626 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 EIF4EBP2Q13542 120 aaPredicted RBP3.14□□□□□ -1.91
LSM5-209ENST00000468872 RCAN2Q14206 197 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 GPR107Q5VW38 600 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 SPESP1Q6UW49 350 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 OR10AD1Q8NGE0 317 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 MRGPRFQ96AM1 343 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 GALNT14Q96FL9 552 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 ZNF681Q96N22 645 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 ANKRD60Q9BZ19 345 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 ZYG11BQ9C0D3 744 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 PARP12Q9H0J9 701 aaKnown RBP3.14□□□□□ -1.91
LSM5-209ENST00000468872 SAV1Q9H4B6 383 aaPredicted RBP3.14□□□□□ -1.91
LSM5-209ENST00000468872 TMEM38AQ9H6F2 299 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 ACP6Q9NPH0 428 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 AHSPQ9NZD4 102 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 OR12D3Q9UGF7 316 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 ZNFX1Q9P2E3 1918 aaKnown RBP3.14□□□□□ -1.91
LSM5-209ENST00000468872 ASTN1O14525 1302 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 UBN2Q6ZU65 1347 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 ZFHX3Q15911 3703 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 ABCC6O95255 1503 aa3.14□□□□□ -1.91
LSM5-209ENST00000468872 SETD2Q9BYW2 2564 aaPredicted RBP3.13□□□□□ -1.91
LSM5-209ENST00000468872 PALLDQ8WX93 1383 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 NACAE9PAV3 2078 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 VPS13AQ96RL7 3174 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 GOLGA6L7A0A1B0GV03 622 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 FAM25EA8MYX2 175 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 SLC9A3R1O14745 358 aaPredicted RBP3.13□□□□□ -1.91
LSM5-209ENST00000468872 ENTPD5O75356 428 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 RP2O75695 350 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 FGFR1OPO95684 399 aaKnown RBP3.13□□□□□ -1.91
LSM5-209ENST00000468872 HLA-DPB1P04440 258 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 EIF4EP06730 217 aaKnown RBP3.13□□□□□ -1.91
LSM5-209ENST00000468872 ATF6P18850 670 aa3.13□□□□□ -1.91
LSM5-209ENST00000468872 LONP1P36776 959 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms