RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 GRK5P34947 590 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 NPY4RP50391 375 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 GRB2P62993 217 aaKnown RBP14.64□□□□□ -0.07
COL7A1-206ENST00000466591 EIF2B1Q14232 305 aaKnown RBP14.64□□□□□ -0.07
COL7A1-206ENST00000466591 MPPED2Q15777 294 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 RSPO1Q2MKA7 263 aaPredicted RBP14.64□□□□□ -0.07
COL7A1-206ENST00000466591 GFOD2Q3B7J2 385 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 WDR25Q64LD2 544 aaPredicted RBP14.64□□□□□ -0.07
COL7A1-206ENST00000466591 ARHGAP24Q8N264 748 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 Q8TCH9 128 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 PCGF1Q9BSM1 259 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 ARMC1Q9NVT9 282 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 C1orf123Q9NWV4 160 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 ANK2Q01484 3957 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 FSTL3O95633 263 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 APOC1P02654 83 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 CRYBA1P05813 215 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 PPIAL4GP0DN37 164 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 SPI1P17947 270 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 GNALP38405 381 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 PMELP40967 661 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 CX3CR1P49238 355 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 MICAQ29983 383 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 OR2T5Q6IEZ7 315 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 SHISA2Q6UWI4 295 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 LYPD4Q6UWN0 246 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 LYPD2Q6UXB3 125 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-206ENST00000466591 ERI1Q8IV48 349 aaKnown RBP14.63□□□□□ -0.07
COL7A1-206ENST00000466591 ZNF511Q8NB15 262 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 OR56B2PQ8NGI1 322 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 OR6N2Q8NGY6 317 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 OR2T29Q8NH02 315 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 UPRTQ96BW1 309 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 CCDC124Q96CT7 223 aaKnown RBP14.63□□□□□ -0.07
COL7A1-206ENST00000466591 NSL1Q96IY1 281 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 TNFRSF19Q9NS68 423 aa14.63□□□□□ -0.07
COL7A1-206ENST00000466591 KIR2DS1A0A191URI9 304 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 LGALS8O00214 317 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 NDUFA2O43678 99 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 RNASE1P07998 156 aaKnown RBP14.62□□□□□ -0.07
COL7A1-206ENST00000466591 HMGA2P52926 109 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 FGF12P61328 243 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 METTL11BQ5VVY1 283 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 BRD3OSQ6XYD6 125 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 PIGWQ7Z7B1 504 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 FTMTQ8N4E7 242 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 PNLDC1Q8NA58 520 aaKnown RBP14.62□□□□□ -0.07
COL7A1-206ENST00000466591 PLPP7Q8NBV4 271 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 OR10G2Q8NGC3 310 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 OR8D4Q8NGM9 314 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 OR10S1Q8NGN2 331 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 INTS14Q96SY0 518 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 MARCH7Q9H992 704 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 BRD7Q9NPI1 651 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 DNAJC27Q9NZQ0 273 aa14.62□□□□□ -0.07
COL7A1-206ENST00000466591 OOEPA6NGQ2 149 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 TOX4O94842 621 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 CFL1P23528 166 aaKnown RBP14.61□□□□□ -0.07
COL7A1-206ENST00000466591 POU1F1P28069 291 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 DDOSTP39656 456 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 SLC25A1P53007 311 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 IL13RA1P78552 427 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 LCN8Q6JVE9 175 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 OR4Q3Q8NH05 313 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 ZNF48Q96MX3 618 aaPredicted RBP14.61□□□□□ -0.07
COL7A1-206ENST00000466591 TEX12Q9BXU0 123 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 TOR3AQ9H497 397 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 ZNF556Q9HAH1 456 aa14.61□□□□□ -0.07
COL7A1-206ENST00000466591 A0A1B0GWJ7 208 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 ANXA2P2A6NMY6 339 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 TMPRSS2O15393 492 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 E2F6O75461 281 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 GYPAP02724 150 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 LIPFP07098 398 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 H2BFMP0C1H6 154 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 CLUP10909 449 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 CALB2P22676 271 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 GSTT1P30711 240 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 MAGEA2P43356 314 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 TRIM25Q14258 630 aaKnown RBP14.6□□□□□ -0.07
COL7A1-206ENST00000466591 SLC9A3R2Q15599 337 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 SNCBQ16143 134 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 FAM57BQ71RH2 274 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 FITM2Q8N6M3 262 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 CCDC197Q8NCU1 140 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 ZNRF4Q8WWF5 429 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 REEP6Q96HR9 211 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 PGAM5Q96HS1 289 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 ZNF747Q9BV97 191 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 PAPOLGQ9BWT3 736 aaKnown RBP14.6□□□□□ -0.07
COL7A1-206ENST00000466591 DGCR6LQ9BY27 220 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 OR10A2Q9H208 303 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 OR51V1Q9H2C8 321 aa14.6□□□□□ -0.07
COL7A1-206ENST00000466591 UNKLQ9H9P5 680 aaKnown RBP14.6□□□□□ -0.07
COL7A1-206ENST00000466591 PRPF19Q9UMS4 504 aaKnown RBP14.6□□□□□ -0.07
COL7A1-206ENST00000466591 DHRS12A0PJE2 317 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 FAM183AA6NL82 134 aa14.59□□□□□ -0.07
COL7A1-206ENST00000466591 HOXA3O43365 443 aaPredicted RBP14.59□□□□□ -0.07
COL7A1-206ENST00000466591 CST1P01037 141 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms