RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 NOL3O60936 208 aaKnown RBP4.76□□□□□ -1.65
VPS41-211ENST00000466017 PNPP00491 289 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 IL1AP01583 271 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 ITGA5P08648 1049 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 HSMCR30P0CW71 290 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 CBR1P16152 277 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 ZNF12P17014 697 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 ZNF32P17041 273 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 CCL1P22362 96 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 CRYGSP22914 178 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 IGHV1-2P23083 117 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 TUBG1P23258 451 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 GADD45AP24522 165 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 EDNRAP25101 427 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 CA7P43166 264 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 RANBP1P43487 201 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 GDI2P50395 445 aaKnown RBP4.76□□□□□ -1.65
VPS41-211ENST00000466017 GTF2A1P52655 376 aaPredicted RBP4.76□□□□□ -1.65
VPS41-211ENST00000466017 CASP6P55212 293 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 TPTEP56180 551 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 PER3P56645 1201 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 RPS11P62280 158 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS41-211ENST00000466017 PSG4Q00888 419 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 FAPQ12884 760 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 FOXF2Q12947 444 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 DYNC1I2Q13409 638 aaKnown RBP4.76□□□□□ -1.65
VPS41-211ENST00000466017 RAB35Q15286 201 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 GABRA6Q16445 453 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 FBXL19-AS1Q494R0 122 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 LIPKQ5VXJ0 399 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 TMEM53Q6P2H8 277 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 KLHL24Q6TFL4 600 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 DRAM2Q6UX65 266 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 LRRN1Q6UXK5 716 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 CFAP77Q6ZQR2 320 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 COLCA1Q6ZS62 124 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 MRGPRGQ86SM5 289 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 TPRA1Q86W33 373 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 LINC00346Q8IVM7 164 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 ZNF433Q8N7K0 673 aaPredicted RBP4.76□□□□□ -1.65
VPS41-211ENST00000466017 OR52H1Q8NGJ2 320 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 SMAP2Q8WU79 429 aaPredicted RBP4.76□□□□□ -1.65
VPS41-211ENST00000466017 ST8SIA2Q92186 375 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 GHSRQ92847 366 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 SPTSSAQ969W0 71 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 FBXO17Q96EF6 278 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 C4orf45Q96LM5 186 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 SORCS2Q96PQ0 1159 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 AMELYQ99218 206 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 ATF6BQ99941 703 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 OR2H1Q9GZK4 316 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 COMMD4Q9H0A8 199 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 OR51E2Q9H255 320 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 MSL2Q9HCI7 577 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 G6PC2Q9NQR9 355 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 SLC17A5Q9NRA2 495 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 TUBG2Q9NRH3 451 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 CENPMQ9NSP4 180 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 TXNL4BQ9NX01 149 aaKnown RBP4.76□□□□□ -1.65
VPS41-211ENST00000466017 ZNF224Q9NZL3 707 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 CRNNQ9UBG3 495 aaPredicted RBP4.76□□□□□ -1.65
VPS41-211ENST00000466017 NUFIP1Q9UHK0 495 aaKnown RBP4.76□□□□□ -1.65
VPS41-211ENST00000466017 GNG8Q9UK08 70 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 OR52A1Q9UKL2 312 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 IKZF2Q9UKS7 526 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 LRP12Q9Y561 859 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 CACNA1CQ13936 2221 aa4.76□□□□□ -1.65
VPS41-211ENST00000466017 TRBV5-7A0A0A0MS05 114 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 A0A1B0GUH1 482 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 TMEM269A0A1B0GVZ9 245 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 DHRS7CA6NNS2 312 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 LOC110117498-PIK3R3F6TDL0 507 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 GABRPO00591 440 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 MAGEB4O15481 346 aaPredicted RBP4.75□□□□□ -1.65
VPS41-211ENST00000466017 ARL6IP5O75915 188 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 ZFPL1O95159 310 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 IGKV3-15P01624 115 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 SERPINA5P05154 406 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 UCHL1P09936 223 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 UBCP0CG48 685 aaKnown RBP4.75□□□□□ -1.65
VPS41-211ENST00000466017 ACHEP22303 614 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 MAPK3P27361 379 aaPredicted RBP4.75□□□□□ -1.65
VPS41-211ENST00000466017 RPS27P42677 84 aaKnown RBP4.75□□□□□ -1.65
VPS41-211ENST00000466017 MTNR1BP49286 362 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 PSMD7P51665 324 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 FOXG1P55316 489 aaPredicted RBP4.75□□□□□ -1.65
VPS41-211ENST00000466017 NANOS3P60323 173 aaKnown RBP4.75□□□□□ -1.65
VPS41-211ENST00000466017 RAB1AP62820 205 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 FABP5Q01469 135 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 PMPCAQ10713 525 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 TAF13Q15543 124 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 CNPY1Q3B7I2 92 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 TBRG1Q3YBR2 411 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 Q499Y3 187 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 ACSM3Q53FZ2 586 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 WDR38Q5JTN6 314 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 TIMM23BQ5SRD1 257 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 MTFR2Q6P444 385 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 VWA1Q6PCB0 445 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 CORO6Q6QEF8 472 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms