RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 METTL9Q9H1A3 318 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 NXF5Q9H1B4 397 aaKnown RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 ZNF768Q9H5H4 540 aaKnown RBP7.58□□□□□ -1.2
VPS50-208ENST00000458707 OPA3Q9H6K4 179 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 SHPKQ9UHJ6 478 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 OR52A1Q9UKL2 312 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 ANAPC10Q9UM13 185 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 EMC9Q9Y3B6 208 aa7.58□□□□□ -1.2
VPS50-208ENST00000458707 PIEZO1Q92508 2521 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 TRBV23-1A0A0A0MS06 115 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 A0A1W2PQD3 144 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 C17orf105B2RV13 164 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 EEF1E1-BLOC1S5C9J1V9 151 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 NDUFS8O00217 210 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 TOX3O15405 576 aaPredicted RBP7.57□□□□□ -1.2
VPS50-208ENST00000458707 PRKNO60260 465 aaPredicted RBP7.57□□□□□ -1.2
VPS50-208ENST00000458707 TNFP01375 233 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 FOLR2P14207 255 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 HOXB2P14652 356 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 PAX6P26367 422 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 CRABP1P29762 137 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 HRH1P35367 487 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 SERPINF1P36955 418 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 RABIFP47224 123 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 NPBWR1P48145 328 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 CASP6P55212 293 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 GLO1Q04760 184 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 AIMP2Q13155 320 aaKnown RBP7.57□□□□□ -1.2
VPS50-208ENST00000458707 GPM6BQ13491 265 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 OR7A5Q15622 319 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 OR2B11Q5JQS5 317 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 AVPI1Q5T686 147 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 OR52W1Q6IF63 320 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 GVQW1Q8N7I0 195 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 ZSCAN4Q8NAM6 433 aaPredicted RBP7.57□□□□□ -1.2
VPS50-208ENST00000458707 AKR7LQ8NHP1 331 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 ST7LQ8TDW4 575 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 DCUN1D4Q92564 292 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 ADIPOR1Q96A54 375 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 SMIM8Q96KF7 97 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 RTN4RQ9BZR6 473 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 SELENOIQ9C0D9 397 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 CNTD2Q9H8S5 307 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 RNF122Q9H9V4 155 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 SPACA1Q9HBV2 294 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 RCC2Q9P258 522 aaKnown RBP7.57□□□□□ -1.2
VPS50-208ENST00000458707 MYEF2Q9P2K5 600 aaKnown RBP7.57□□□□□ -1.2
VPS50-208ENST00000458707 LPAR3Q9UBY5 353 aa7.57□□□□□ -1.2
VPS50-208ENST00000458707 MEX3AA1L020 520 aaKnown RBP7.56□□□□□ -1.2
VPS50-208ENST00000458707 C5orf51A6NDU8 294 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 RHPN2P1A8MT19 583 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 HSBP1L1C9JCN9 74 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 H0YIZ8 118 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 TO15178 435 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 LMX1BO60663 402 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 ICOSLGO75144 302 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 ZNF806P0C7X5 589 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 SPP1P10451 314 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 ZNF16P17020 682 aaPredicted RBP7.56□□□□□ -1.2
VPS50-208ENST00000458707 NDUFB7P17568 137 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 MSX1P28360 303 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 SUCLG1P53597 346 aaKnown RBP7.56□□□□□ -1.2
VPS50-208ENST00000458707 TOMM34Q15785 309 aaPredicted RBP7.56□□□□□ -1.2
VPS50-208ENST00000458707 SLC22A6Q4U2R8 563 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 TMEM128Q5BJH2 165 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 TMEM240Q5SV17 173 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 ZNF529Q6P280 563 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 PRSS54Q6PEW0 395 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 KCTD9Q7L273 389 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 SLC24A4Q8NFF2 622 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 SLC26A10Q8NG04 563 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 ADAMTS17Q8TE56 1095 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 CASTOR1Q8WTX7 329 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 PTPMT1Q8WUK0 201 aaPredicted RBP7.56□□□□□ -1.2
VPS50-208ENST00000458707 NUDCD2Q8WVJ2 157 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 TMED6Q8WW62 240 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 RELTQ969Z4 430 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 AQP10Q96PS8 301 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 SSX3Q99909 188 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 NRIP2Q9BQI9 281 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 RAB18Q9NP72 206 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 HS3ST3A1Q9Y663 406 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 MYO7BQ6PIF6 2116 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 KIAA0100Q14667 2235 aaKnown RBP7.56□□□□□ -1.2
VPS50-208ENST00000458707 FER1L5A0AVI2 2057 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 MUC3AQ02505 3323 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 F5P12259 2224 aa7.56□□□□□ -1.2
VPS50-208ENST00000458707 LOC100509620A0A075B734 347 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 TMEM14DPA8MWL7 114 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 C10orf142B7Z368 130 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 ALG1L2C9J202 215 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 PLPP3O14495 311 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 TCAPO15273 167 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 KCNAB3O43448 404 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 IFNA2P01563 188 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 IFNA10P01566 189 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 IGKV3-11P04433 115 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 CRYBA1P05813 215 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 VSIG8P0DPA2 414 aa7.55□□□□□ -1.2
VPS50-208ENST00000458707 MUC1P15941 1255 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms