RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 M1APQ8TC57 530 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 NPRL2Q8WTW4 380 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 CASTOR1Q8WTX7 329 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 PHB2Q99623 299 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 ZFYVE21Q9BQ24 234 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 PARP11Q9NR21 331 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 AMDHD2Q9Y303 409 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 C9J4A7 227 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 PRAMEF26H0Y7S4 382 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 THY1P04216 161 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 APLNRP35414 380 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 FAM189A2Q15884 450 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 AWAT2Q6E213 333 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 TDHQ8IZJ6 230 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 THOC3Q96J01 351 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 YPEL4Q96NS1 127 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 CHRNA9Q9UGM1 479 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 TCRBV21S2A2A0A5A6 115 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 XKRYO14609 159 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 NKX2-2O95096 273 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 TSPAN15O95858 294 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 CYB5AP00167 134 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 CSTAP01040 98 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 IL13RA1P78552 427 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 LEG1Q6P5S2 330 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 FIGLAQ6QHK4 219 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 PTCHD1Q96NR3 888 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 GPR174Q9BXC1 333 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 TAF9BQ9HBM6 251 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 CAPN10Q9HC96 672 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 FARSAQ9Y285 508 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 ARHGEF17Q96PE2 2063 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 A0A087WUJ7 227 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 MSGN1A6NI15 193 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 CTSVO60911 334 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 RPP14O95059 124 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 TDGF1P3P51864 188 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 ADAM8P78325 824 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 EGR3Q06889 387 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 LYG2Q86SG7 212 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 BIVMQ86UB2 503 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 ARL14Q8N4G2 192 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 ZNF615Q8N8J6 731 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 OR14K1Q8NGZ2 314 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 RNF126Q9BV68 326 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 GRHPRQ9UBQ7 328 aa12.05□□□□□ -0.48
SYNGAP1-204ENST00000449372 BRWD1Q9NSI6 2320 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 A0A1W2PPC1 479 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 ZNF705GA8MUZ8 300 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 SLC35E2P0CK97 266 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 RAC2P15153 192 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 SLC6A9P48067 706 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 CYCSP99999 105 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 JOSD1Q15040 202 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 KCTD18Q6PI47 426 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 GKN2Q86XP6 184 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 ZNF385AQ96PM9 386 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 MRPS18CQ9Y3D5 142 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 TMEM238LA0A1B0GVL6 79 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 CSN2P05814 226 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 GZMBP10144 247 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 SULT1A2P50226 295 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 SRSF5Q13243 272 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 PPP1R1AQ13522 171 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 GUK1Q16774 197 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 SLC25A43Q8WUT9 341 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 JSRP1Q96MG2 331 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 KCNJ16Q9NPI9 418 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 SLCO1B1Q9Y6L6 691 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 ALOX12BO75342 701 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 KIR3DL2P43630 455 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 PPICP45877 212 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 SOX2P48431 317 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 OR4N5Q8IXE1 308 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 HIST1H2BLQ99880 126 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 PRRT1Q99946 306 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 C6orf106Q9H6K1 298 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 TMEM74BQ9NUR3 256 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 WSB2Q9NYS7 404 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 ICAM5Q9UMF0 924 aa12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 PUS1Q9Y606 427 aaKnown RBP eCLIP12.04□□□□□ -0.48
SYNGAP1-204ENST00000449372 WNT11O96014 354 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 TRGC2P03986 189 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 ZBTB25P24278 435 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 SERPINF1P36955 418 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 INSM1Q01101 510 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 HYAL4Q2M3T9 481 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 DCAF10Q5QP82 559 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 ANKRD16Q6P6B7 361 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 Q6ZSR6 202 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 TIPARPQ7Z3E1 657 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 PEG10Q86TG7 708 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 HSD17B11Q8NBQ5 300 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 OR13H1Q8NG92 308 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 PARP12Q9H0J9 701 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 LOC100289279A0A1B0GTE1 492 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 PEX12O00623 359 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 RRP8O43159 456 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 HNF1AP20823 631 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 LSSP48449 732 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms