RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ZNF420Q8TAQ5 688 aaPredicted RBP8.84□□□□□ -0.99
MCF2L-216ENST00000439475 TMEM163Q8TC26 289 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 ASB17Q8WXJ9 295 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 ITFG2Q969R8 447 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 SGK3Q96BR1 496 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 LPAR2Q9HBW0 351 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 GCM1Q9NP62 436 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 BRD7Q9NPI1 651 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 C14orf119Q9NWQ9 140 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 HIF1ANQ9NWT6 349 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 DNAJC27Q9NZQ0 273 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 ZNF391Q9UJN7 358 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 OAZ3Q9UMX2 235 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 TANC2Q9HCD6 1990 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 VPS13CQ709C8 3753 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 FN1P02751 2386 aaKnown RBP8.83□□□□□ -1
MCF2L-216ENST00000439475 PPIAL4EA0A075B759 164 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 A0A1B0GWJ7 208 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 ACOD1A6NK06 481 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 SAC3D1A6NKF1 404 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 PPIAL4DF5H284 164 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 PRKYO43930 277 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 IGHV2-70P01814 119 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 IGHV2-5P01817 119 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 PPIAL4FP0DN26 164 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 CA6P23280 308 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 GATA3P23771 443 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 DCTDP32321 178 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 THBS2P35442 1172 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 MDH2P40926 338 aaKnown RBP8.83□□□□□ -1
MCF2L-216ENST00000439475 GATA4P43694 442 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 CDC42P60953 191 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 SCGB2A2Q13296 93 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 SPRNQ5BIV9 151 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 C12orf73Q69YU5 71 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 FAHD2BQ6P2I3 314 aaPredicted RBP8.83□□□□□ -1
MCF2L-216ENST00000439475 MOGAT3Q86VF5 341 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 PRIMA1Q86XR5 153 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 BBS1Q8NFJ9 593 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 OR56B2PQ8NGI1 322 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 OR8S1Q8NH09 359 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 TRUB1Q8WWH5 349 aaKnown RBP8.83□□□□□ -1
MCF2L-216ENST00000439475 SPSB4Q96A44 273 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 FAHD2AQ96GK7 314 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 REEP6Q96HR9 211 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 CNN2Q99439 309 aaKnown RBP8.83□□□□□ -1
MCF2L-216ENST00000439475 CIB1Q99828 191 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 RIBC2Q9H4K1 309 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 FN3KRPQ9HA64 309 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 PATZ1Q9HBE1 687 aaKnown RBP8.83□□□□□ -1
MCF2L-216ENST00000439475 ABCB9Q9NP78 766 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 PPIAL4AQ9Y536 164 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 NAV3Q8IVL0 2385 aa8.83□□□□□ -1
MCF2L-216ENST00000439475 MTORP42345 2549 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 A0A0G2JMP0 313 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 A0A0X1KG70 313 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 ANXA2P2A6NMY6 339 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 ZNF670-ZNF695F2Z2N8 137 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 PLPP2O43688 288 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 FSTL3O95633 263 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 CYB5R3P00387 301 aaPredicted RBP8.82□□□□□ -1
MCF2L-216ENST00000439475 MRPL3P09001 348 aaKnown RBP8.82□□□□□ -1
MCF2L-216ENST00000439475 ATP6V1E1P36543 226 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 GNALP38405 381 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 MMP16P51512 607 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 RIDAP52758 137 aaKnown RBP8.82□□□□□ -1
MCF2L-216ENST00000439475 PRSS12P56730 875 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 EFNB1P98172 346 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 FAM3AP98173 230 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 POU4F2Q12837 409 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 MAB21L1Q13394 359 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 TMED1Q13445 227 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 KCNJ8Q15842 424 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 AADACL4Q5VUY2 407 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 LRRN1Q6UXK5 716 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 ZNF679Q8IYX0 411 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 OR4M2Q8NGB6 313 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 OR8J1Q8NGP2 316 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 RFKQ969G6 155 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 HIST1H2AAQ96QV6 131 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 IL4I1Q96RQ9 567 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 AMELYQ99218 206 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 PKP2Q99959 881 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 MICU1Q9BPX6 476 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 ADAT1Q9BUB4 502 aaKnown RBP8.82□□□□□ -1
MCF2L-216ENST00000439475 C9orf16Q9BUW7 83 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 GABARAPL3Q9BY60 117 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 TRIM36Q9NQ86 728 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 HAO2Q9NYQ3 351 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 RNF7Q9UBF6 113 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 MIOXQ9UGB7 285 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 WARS2Q9UGM6 360 aaKnown RBP8.82□□□□□ -1
MCF2L-216ENST00000439475 METRNQ9UJH8 293 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 IKZF2Q9UKS7 526 aa8.82□□□□□ -1
MCF2L-216ENST00000439475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.82□□□□□ -15e-7■■□□□ 12.7
MCF2L-216ENST00000439475 TMEM269A0A1B0GVZ9 245 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 CCDC182A6NF36 153 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 A6NLC8 198 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 SNTNA6NMZ2 147 aa8.81□□□□□ -1
MCF2L-216ENST00000439475 J3QLI3 93 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms