RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 CLTAP09496 248 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 ANXA8P13928 327 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 CTRB1P17538 263 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 EIF2S2P20042 333 aaKnown RBP2.08□□□□□ -2.08
VPS41-207ENST00000439468 TCN2P20062 427 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 F2RP25116 425 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 NBL1P41271 181 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 SERPINB8P50452 374 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 RAB7AP51149 207 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 PFN3P60673 137 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 SEMG2Q02383 582 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 DGCR6Q14129 220 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 ANXA8L1Q5VT79 327 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 TWF2Q6IBS0 349 aaKnown RBP2.08□□□□□ -2.08
VPS41-207ENST00000439468 CBLN2Q8IUK8 224 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 METTL13Q8N6R0 699 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 BPIFCQ8NFQ6 507 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 OR56A4Q8NGH8 313 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 OR52E2Q8NGJ4 325 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 OR52E5Q8NH55 327 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 OR5K2Q8NHB8 316 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 SYNPRQ8TBG9 265 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 PIFOQ8TCI5 191 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 AGR3Q8TD06 166 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 EXOSC8Q96B26 276 aaKnown RBP2.08□□□□□ -2.08
VPS41-207ENST00000439468 C8orf44Q96CB5 159 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 GSDMAQ96QA5 445 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 PRO3102Q9H379 93 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 RPP21Q9H633 154 aaKnown RBP2.08□□□□□ -2.08
VPS41-207ENST00000439468 TMEM38AQ9H6F2 299 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 SYNDIG1Q9H7V2 258 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 UBE2ZQ9H832 354 aaPredicted RBP2.08□□□□□ -2.08
VPS41-207ENST00000439468 ZNF355PQ9NSJ1 428 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 C20orf96Q9NUD7 363 aaPredicted RBP2.08□□□□□ -2.08
VPS41-207ENST00000439468 ZNF282Q9UDV7 671 aaPredicted RBP2.08□□□□□ -2.08
VPS41-207ENST00000439468 TTC41PQ6P2S7 1318 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 WDFY4Q6ZS81 3184 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 PPLO60437 1756 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 LTN1O94822 1766 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 CCDC144AA2RUR9 1427 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 EEA1Q15075 1411 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 SSH2Q76I76 1423 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 MAST4O15021 2626 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 ALPK3Q96L96 1907 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 CHD6Q8TD26 2715 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 TRANK1O15050 2925 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 XIRP2A4UGR9 3374 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 IGKV1-8A0A0C4DH67 115 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 LYRM9A8MSI8 78 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 NVLO15381 856 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 GCM2O75603 506 aaPredicted RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 RHOXF2BP0C7M4 288 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 IGHV1-8P0DP01 117 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 CCNB1P14635 433 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 IGFBP3P17936 291 aaPredicted RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 ATF6P18850 670 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 TUBG1P23258 451 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 U2AF2P26368 475 aaKnown RBP eCLIP2.07□□□□□ -2.082e-8■■■■□ 24.8
VPS41-207ENST00000439468 MRPL19P49406 292 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 CDKN2DP55273 166 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 RPS15AP62244 130 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 RPS23P62266 143 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 ORMDL2Q53FV1 153 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 THEM4Q5T1C6 240 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 ZNF684Q5T5D7 378 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 SAXO2Q658L1 398 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 TTC23LQ6PF05 361 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 NPSR1Q6W5P4 371 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 MRPL55Q7Z7F7 128 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 PRSS58Q8IYP2 241 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 KATNAL2Q8IYT4 538 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 TTC29Q8NA56 475 aaPredicted RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 C11orf72Q8NBR9 251 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 GPR26Q8NDV2 337 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 OR52K2Q8NGK3 314 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 OR8U1Q8NH10 309 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 UBALD1Q8TB05 177 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 OR51E1Q8TCB6 317 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 ABHD3Q8WU67 409 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 TSEN15Q8WW01 171 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 APH1BQ8WW43 257 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 TMEM230Q96A57 120 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 MRGPRFQ96AM1 343 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 XPO6Q96QU8 1125 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 TIMM17AQ99595 171 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 FOXC2Q99958 501 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 UQCC2Q9BRT2 126 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 ANKRD60Q9BZ19 345 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 EXO5Q9H790 373 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 LYRM4Q9HD34 91 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 TUBG2Q9NRH3 451 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 DDX18Q9NVP1 670 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 AHSPQ9NZD4 102 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 CTSFQ9UBX1 484 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 TRMT112Q9UI30 125 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 RCL1Q9Y2P8 373 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 YTHDF2Q9Y5A9 579 aaKnown RBP2.07□□□□□ -2.08
VPS41-207ENST00000439468 KCNE3Q9Y6H6 103 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 RGPD5Q99666 1765 aa2.07□□□□□ -2.08
VPS41-207ENST00000439468 BRD4O60885 1362 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms