RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 RPS23P62266 143 aaKnown RBP17.85■□□□□ 0.45
CHD3-204ENST00000439235 RPS11P62280 158 aaKnown RBP eCLIP17.85■□□□□ 0.45
CHD3-204ENST00000439235 FABP5Q01469 135 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 ZNF92Q03936 586 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 ACSM3Q53FZ2 586 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 PIAS4Q8N2W9 510 aaPredicted RBP17.85■□□□□ 0.45
CHD3-204ENST00000439235 PLPP7Q8NBV4 271 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 OR13C3Q8NGS6 347 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 OR10AC1Q8NH08 325 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 ZNF420Q8TAQ5 688 aaPredicted RBP17.85■□□□□ 0.45
CHD3-204ENST00000439235 FAM222BQ8WU58 562 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 PHYHIPQ92561 330 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 PLPPR2Q96GM1 343 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 RADILQ96JH8 1075 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 LYZL4Q96KX0 146 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 BCL7BQ9BQE9 202 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 LOC100506127A0A0U1RQW1 187 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 hCG_38984A0A1B0GV85 526 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.84■□□□□ 0.45
CHD3-204ENST00000439235 CCDC160A6NGH7 325 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 ZNF879B4DU55 563 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 H3BSA7 217 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 SC5DO75845 299 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 RNF224P0DH78 156 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 IGFBP2P18065 325 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 SRSF1Q07955 248 aaKnown RBP eCLIP17.84■□□□□ 0.45
CHD3-204ENST00000439235 SPOCK1Q08629 439 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 SNTB2Q13425 540 aaKnown RBP17.84■□□□□ 0.45
CHD3-204ENST00000439235 PGAP1Q75T13 922 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 CEACAM19Q7Z692 300 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 DMRTC2Q8IXT2 367 aaPredicted RBP17.84■□□□□ 0.45
CHD3-204ENST00000439235 NUP37Q8NFH4 326 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 OR51A4Q8NGJ6 313 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 RAB2BQ8WUD1 216 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 OR14A2Q96R54 314 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 PLEKHA1Q9HB21 404 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 CRIM1Q9NZV1 1036 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 GSTK1Q9Y2Q3 226 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 CEPT1Q9Y6K0 416 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 CACNA1CQ13936 2221 aa17.84■□□□□ 0.45
CHD3-204ENST00000439235 CLEC18AA5D8T8 446 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 DHRS7CA6NNS2 312 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 H3BSH0 61 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 C19orf84I3L1E1 186 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 GPX5O75715 221 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 CD3EP07766 207 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 FGF9P31371 208 aaPredicted RBP17.83■□□□□ 0.44
CHD3-204ENST00000439235 SOX2P48431 317 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 GK2Q14410 553 aaPredicted RBP17.83■□□□□ 0.44
CHD3-204ENST00000439235 ZMAT1Q5H9K5 638 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 SLC22A25Q6T423 547 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 CLEC18BQ6UXF7 455 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 UNQ9370/PRO34162Q6UXP9 181 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 FBXW12Q6X9E4 464 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 TMEM91Q6ZNR0 172 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 SLC16A12Q6ZSM3 486 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 Q6ZSR3 168 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 CLEC18CQ8NCF0 446 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 OR14K1Q8NGZ2 314 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 SLC25A40Q8TBP6 338 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 RPL3LQ92901 407 aaKnown RBP17.83■□□□□ 0.44
CHD3-204ENST00000439235 C10orf35Q96D05 121 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 REPIN1Q9BWE0 567 aaKnown RBP17.83■□□□□ 0.44
CHD3-204ENST00000439235 NAA50Q9GZZ1 169 aaKnown RBP17.83■□□□□ 0.44
CHD3-204ENST00000439235 RBM38Q9H0Z9 239 aaKnown RBP17.83■□□□□ 0.44
CHD3-204ENST00000439235 POFUT1Q9H488 388 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 TXNL4BQ9NX01 149 aaKnown RBP17.83■□□□□ 0.44
CHD3-204ENST00000439235 V9GYS6 101 aa17.83■□□□□ 0.44
CHD3-204ENST00000439235 PCNX1Q96RV3 2341 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 ARL6IP5O75915 188 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 RAF1P04049 648 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 ZNF20P17024 532 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 GLRXP35754 106 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 MAP2K3P46734 347 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 GSK3AP49840 483 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 NKX6-1P78426 367 aaPredicted RBP17.82■□□□□ 0.44
CHD3-204ENST00000439235 FAM3AP98173 230 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 OR8B8Q15620 311 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 SPATA46Q5T0L3 261 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 RGS7BPQ6MZT1 257 aaPredicted RBP17.82■□□□□ 0.44
CHD3-204ENST00000439235 SEMA6DQ8NFY4 1073 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 TMEM106AQ96A25 262 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 DERL3Q96Q80 235 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 OR2J1Q9GZK6 312 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 FAM192AQ9GZU8 254 aa17.82■□□□□ 0.44
CHD3-204ENST00000439235 HCFC1P51610 2035 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 TRBV5-7A0A0A0MS05 114 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 GGT3PA6NGU5 568 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 A6NHS1 94 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 PRSS44E7EML9 344 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 UCHL1P09936 223 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 RAC2P15153 192 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 SELEP16581 610 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 GCH1P30793 250 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 ERVS71-1P61550 626 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 INSL4Q14641 139 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 ZNF718Q3SXZ3 478 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 C22orf42Q6IC83 251 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 MEX3BQ6ZN04 569 aaKnown RBP17.81■□□□□ 0.44
CHD3-204ENST00000439235 ISOC1Q96CN7 298 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms