RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 PHYHD1Q5SRE7 291 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 CXXC5Q7LFL8 322 aaKnown RBP12.72□□□□□ -0.37
SGCE-202ENST00000415788 GIMAP1Q8WWP7 306 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 CMTM3Q96MX0 182 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 DDOQ99489 341 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 USB1Q9BQ65 265 aaKnown RBP12.72□□□□□ -0.37
SGCE-202ENST00000415788 OR10A4Q9H209 315 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 HIVEP3Q5T1R4 2406 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 A0A0G2JK05 382 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 hCG_1807616A0A1W2PRN6 198 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 H7C1C5 153 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 MT-ND5P03915 603 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 ATF4P18848 351 aaPredicted RBP12.72□□□□□ -0.37
SGCE-202ENST00000415788 IGHV1-2P23083 117 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 SRP9P49458 86 aaKnown RBP12.72□□□□□ -0.37
SGCE-202ENST00000415788 ZNF84P51523 738 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 RPS7P62081 194 aaKnown RBP12.72□□□□□ -0.37
SGCE-202ENST00000415788 LCN6P62502 163 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 DHODHQ02127 395 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 SRSF1Q07955 248 aaKnown RBP eCLIP12.72□□□□□ -0.37
SGCE-202ENST00000415788 CRMP1Q14194 572 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 CEACAM16Q2WEN9 425 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 NRN1LQ496H8 165 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 SFRP5Q5T4F7 317 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 OR7E24Q6IFN5 339 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 SLC25A47Q6Q0C1 308 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 LINGO2Q7L985 606 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 MS4A15Q8N5U1 240 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.72□□□□□ -0.37
SGCE-202ENST00000415788 C1orf162Q8NEQ5 155 aaPredicted RBP12.72□□□□□ -0.37
SGCE-202ENST00000415788 OR2T4Q8NH00 348 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 HAVCR2Q8TDQ0 301 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 RDH8Q9NYR8 311 aa12.72□□□□□ -0.37
SGCE-202ENST00000415788 NKX2-6A6NCS4 301 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 OR6C68A6NDL8 312 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 ITGA5P08648 1049 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 SLC25A1P53007 311 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 FMODQ06828 376 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 CDSNQ15517 529 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 B3GLCTQ6Y288 498 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 STAC2Q6ZMT1 411 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 MEPCEQ7L2J0 689 aaKnown RBP12.71□□□□□ -0.37
SGCE-202ENST00000415788 CXorf67Q86X51 503 aaPredicted RBP12.71□□□□□ -0.37
SGCE-202ENST00000415788 OR51G2Q8NGK0 314 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 KISS1RQ969F8 398 aaPredicted RBP12.71□□□□□ -0.37
SGCE-202ENST00000415788 BOD1Q96IK1 185 aa12.71□□□□□ -0.37
SGCE-202ENST00000415788 ISG20L2Q9H9L3 353 aaKnown RBP12.71□□□□□ -0.37
SGCE-202ENST00000415788 HINT3Q9NQE9 182 aaKnown RBP12.71□□□□□ -0.37
SGCE-202ENST00000415788 KLF2Q9Y5W3 355 aaPredicted RBP12.71□□□□□ -0.37
SGCE-202ENST00000415788 INTS1Q8N201 2190 aaKnown RBP12.71□□□□□ -0.38
SGCE-202ENST00000415788 TRAV1-2A0A0B4J238 106 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 DAPL1A0PJW8 107 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 PRR23D1E9PI22 279 aaPredicted RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 C16orf97H3BN30 126 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 ZNF593O00488 134 aaPredicted RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 SLC16A7O60669 478 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 PEX14O75381 377 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 KHDRBS3O75525 346 aaKnown RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 SLC2A10O95528 541 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 PRR23D2P0DMB1 279 aaPredicted RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 GUCA1AP43080 201 aaPredicted RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 SORDQ00796 357 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 SNTB2Q13425 540 aaKnown RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 SEZ6L2Q6UXD5 910 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 ZNF627Q7L945 461 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 CPOQ8IVL8 374 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 C17orf78Q8N4C9 275 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 ZNF433Q8N7K0 673 aaPredicted RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 BBS1Q8NFJ9 593 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 STEAP2Q8NFT2 490 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 OR2T35Q8NGX2 323 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 ABHD4Q8TB40 342 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 FOXB1Q99853 325 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 NMNAT2Q9BZQ4 307 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 SC5DO75845 299 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 SERPINA3P01011 423 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 CTLA4P16410 223 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 RAB3BP20337 219 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 CENPAP49450 140 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 TFF3Q07654 80 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 FAM27E3Q08E93 113 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 KLF9Q13886 244 aaPredicted RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 OPCMLQ14982 345 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 NHLRC3Q5JS37 347 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 METTL11BQ5VVY1 283 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 ANKRD16Q6P6B7 361 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 BHLHA15Q7RTS1 189 aaPredicted RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 SSX8Q7RTT4 187 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 CEACAM19Q7Z692 300 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 OR6V1Q8N148 313 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 FTMTQ8N4E7 242 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 CYB561A3Q8NBI2 242 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 DACT3Q96B18 629 aaPredicted RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 ZCCHC4Q9H5U6 513 aa12.7□□□□□ -0.38
SGCE-202ENST00000415788 SIRT4Q9Y6E7 314 aaPredicted RBP12.7□□□□□ -0.38
SGCE-202ENST00000415788 SLC22A31A6NKX4 558 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 KRBOX1C9JBD0 128 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 LYZL6O75951 148 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 ECDO95905 644 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms