RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PPP3R1P63098 170 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 MRPL49Q13405 166 aaKnown RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 TBC1D28Q2M2D7 210 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 SLC25A35Q3KQZ1 300 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 TIMM23BQ5SRD1 257 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 ZNF529Q6P280 563 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 RFPL4BQ6ZWI9 263 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 LIX1LQ8IVB5 337 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 LAX1Q8IWV1 398 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 ZNF101Q8IZC7 436 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 PAQR4Q8N4S7 273 aaPredicted RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 NKAIN3Q8N8D7 197 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 CCDC54Q8NEL0 328 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 DNAAF1Q8NEP3 725 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 OR14K1Q8NGZ2 314 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 AKAP1Q92667 903 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS41-204ENST00000413141 RND1Q92730 232 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 SPSB4Q96A44 273 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 APOBEC3DQ96AK3 386 aaPredicted RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 SGK3Q96BR1 496 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 S100PBPQ96BU1 408 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 FGGYQ96C11 551 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 KCTD12Q96CX2 325 aaKnown RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 ADAT3Q96EY9 351 aaPredicted RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 SLC30A2Q9BRI3 323 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 ACTR6Q9GZN1 396 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 CXorf56Q9H5V9 222 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 MOV10Q9HCE1 1003 aaKnown RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 ELOVL5Q9NYP7 299 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 CRNNQ9UBG3 495 aaPredicted RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 DAPK2Q9UIK4 370 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 OSGIN2Q9Y236 505 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 AK6Q9Y3D8 172 aaKnown RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 PEX16Q9Y5Y5 336 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 SLC25A15Q9Y619 301 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 CACNA1CQ13936 2221 aa5.76□□□□□ -1.49
VPS41-204ENST00000413141 INTS1Q8N201 2190 aaKnown RBP5.76□□□□□ -1.49
VPS41-204ENST00000413141 IGHV1-18A0A0C4DH31 117 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 A6NIN4 97 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 ANXA2P2A6NMY6 339 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 IFITM5A6NNB3 132 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 C3orf80F5H4A9 247 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 J3QW42 95 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 CCL21O00585 134 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 ATXN7O15265 892 aaPredicted RBP5.75□□□□□ -1.49
VPS41-204ENST00000413141 SULT1B1O43704 296 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 SMPD2O60906 423 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 AGFG2O95081 481 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 IGLV1-44P01699 117 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 CECR9P0C854 216 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 SLC2A2P11168 524 aaPredicted RBP5.75□□□□□ -1.49
VPS41-204ENST00000413141 BMP4P12644 408 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 FAHP16930 419 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 ATF1P18846 271 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 ACKR3P25106 362 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 S100A5P33763 92 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 THBS4P35443 961 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 GNALP38405 381 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 DDOSTP39656 456 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 PEX19P40855 299 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 BMXP51813 675 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 ZNF92Q03936 586 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 FAM27E3Q08E93 113 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 DYNC1I2Q13409 638 aaKnown RBP5.75□□□□□ -1.49
VPS41-204ENST00000413141 TNK1Q13470 666 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 OR8B8Q15620 311 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 MOGQ16653 247 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 IDNKQ5T6J7 187 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 C1QTNF12Q5T7M4 302 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 PGAP1Q75T13 922 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 SERPINA12Q8IW75 414 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 MFSD4AQ8N468 514 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 FAM169BQ8N8A8 192 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 SEMA6DQ8NFY4 1073 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 OR1M1Q8NGA1 313 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 OR51A2Q8NGJ7 313 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 OR5D14Q8NGL3 314 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 OR13C9Q8NGT0 318 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 ACOT12Q8WYK0 555 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 PP6455Q8WZ26 134 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 C10orf35Q96D05 121 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 WDFY2Q96P53 400 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 CHST5Q9GZS9 411 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 ZCCHC4Q9H5U6 513 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 OPA3Q9H6K4 179 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 CDH20Q9HBT6 801 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 AKIP1Q9NQ31 210 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 PIGLQ9Y2B2 252 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 CMAHPQ9Y471 501 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 V9GY05 133 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 NBEAQ8NFP9 2946 aa5.75□□□□□ -1.49
VPS41-204ENST00000413141 A0A0B4J203 849 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 CLDN25C9JDP6 229 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 CTDSP2O14595 271 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 RGS5O15539 181 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 TMEM127O75204 238 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 NGFP01138 241 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 SNRPBP14678 240 aaKnown RBP5.74□□□□□ -1.49
VPS41-204ENST00000413141 RAB3AP20336 220 aa5.74□□□□□ -1.49
VPS41-204ENST00000413141 BDKRB2P30411 391 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms