RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SGK3Q96BR1 496 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 S100PBPQ96BU1 408 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 LYZL4Q96KX0 146 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 WACQ9BTA9 647 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ABCB9Q9NP78 766 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 B3GNT2Q9NY97 397 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PIGLQ9Y2B2 252 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PKDREJQ9NTG1 2253 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 FLNCQ14315 2725 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 NOTOA8MTQ0 251 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 A8MXE2 369 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 J3QRK9 145 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PDCD5O14737 125 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 FAM157BP0CG42 384 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 EPXP11678 715 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 SNRPBP14678 240 aaKnown RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 ADRA2CP18825 462 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ATF1P18846 271 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ZNF92Q03936 586 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 HLXQ14774 488 aaPredicted RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 MOGQ16653 247 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 TBC1D28Q2M2D7 210 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 GLYATL3Q5SZD4 288 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 SPATA46Q5T0L3 261 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 DDI2Q5TDH0 399 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ASPHD2Q6ICH7 369 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 LIX1LQ8IVB5 337 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ST6GALNAC3Q8NDV1 305 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 OR5D14Q8NGL3 314 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 THRSPQ92748 146 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 POM121L2Q96KW2 1035 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 SPACA5Q96QH8 159 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 GFI1Q99684 422 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 VKORC1Q9BQB6 163 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ZNF629Q9UEG4 869 aaPredicted RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 MEMO1Q9Y316 297 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PEX16Q9Y5Y5 336 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 V9GY05 133 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 A0A0G2JK05 382 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 A0A0U1RQV5 110 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 OR5H1A6NKK0 313 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 IFITM5A6NNB3 132 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 MSTNO14793 375 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 HPGDSO60760 199 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 MTRF1O75570 445 aaKnown RBP3.21□□□□□ -1.89
RTN4-208ENST00000404909 DHRS3O75911 302 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 BMP4P12644 408 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 SPANXN2Q5MJ10 180 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 DPPA2Q7Z7J5 298 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 LRRTM1Q86UE6 522 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 CCDC36Q8IYA8 594 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 SAMD12Q8N8I0 201 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 WDR31Q8NA23 367 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 BHLHE23Q8NDY6 225 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 SEMA6DQ8NFY4 1073 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 PRR7Q8TB68 274 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 MUCL1Q96DR8 90 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 ZC3HAV1LQ96H79 300 aaKnown RBP3.21□□□□□ -1.89
RTN4-208ENST00000404909 CCDC120Q96HB5 630 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 DIRAS2Q96HU8 199 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 C1QTNF5Q9BXJ0 243 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 ACTR6Q9GZN1 396 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 SP140LQ9H930 580 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 CDH20Q9HBT6 801 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 CGGBP1Q9UFW8 167 aaPredicted RBP3.21□□□□□ -1.89
RTN4-208ENST00000404909 STARD10Q9Y365 291 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 CMAHPQ9Y471 501 aa3.21□□□□□ -1.89
RTN4-208ENST00000404909 CHD6Q8TD26 2715 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 A0A075B6Q4 140 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 FAM25AB3EWG3 89 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 FAM25CB3EWG5 89 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 FAM25GB3EWG6 89 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 CLDN25C9JDP6 229 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 COX5BP10606 129 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 ZNF14P17017 642 aaPredicted RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 RAB3AP20336 220 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 ACKR3P25106 362 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 TNFSF8P32971 234 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 CA7P43166 264 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 ZNF83P51522 516 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 MALLQ13021 153 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 GK2Q14410 553 aaPredicted RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 P2RY14Q15391 338 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 TAB1Q15750 504 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 KRTAP27-1Q3LI81 207 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 TMEM211Q6ICI0 200 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 MZT2AQ6P582 158 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 PGAP1Q75T13 922 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 CROCCP3Q8IVE0 287 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 PARP16Q8N5Y8 322 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 C1orf162Q8NEQ5 155 aaPredicted RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 OR1M1Q8NGA1 313 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 OR52N4Q8NGI2 321 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 OR14K1Q8NGZ2 314 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 TRMT10AQ8TBZ6 339 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 APOBEC3DQ96AK3 386 aaPredicted RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 NXF2Q9GZY0 626 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 PIGMQ9H3S5 423 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 LIN7BQ9HAP6 207 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 HMG20AQ9NP66 347 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms