RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 ADGRE4PQ86SQ3 457 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF584Q8IVC4 421 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 BEST3Q8N1M1 668 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 SPEM1Q8N4L4 309 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 PMM1Q92871 262 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 LYZL4Q96KX0 146 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 GSKIPQ9P0R6 139 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 COPZ2Q9P299 210 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 MAB21L2Q9Y586 359 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 WIF1Q9Y5W5 379 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 AGPAT2O15120 278 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF43P17038 809 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 GLRA1P23415 457 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 S100A11P31949 105 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 CX3CR1P49238 355 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 MICBQ29980 383 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 SP6Q3SY56 376 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 GLT8D1Q68CQ7 371 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 OR4K17Q8NGC6 315 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 OR6N1Q8NGY5 312 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF845Q96IR2 970 aaPredicted RBP10.35□□□□□ -0.75
ITSN1-211ENST00000399355 COLQQ9Y215 455 aaPredicted RBP10.35□□□□□ -0.75
ITSN1-211ENST00000399355 NPTNQ9Y639 398 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 EIF4E2O60573 245 aaKnown RBP10.35□□□□□ -0.75
ITSN1-211ENST00000399355 ECDO95905 644 aaPredicted RBP10.35□□□□□ -0.75
ITSN1-211ENST00000399355 UMODP07911 640 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 M6PRP20645 277 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 AP3S2P59780 193 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 ROM1Q03395 351 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 ISXQ2M1V0 245 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 NHLRC3Q5JS37 347 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 PPP1R3BQ86XI6 285 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 UEVLDQ8IX04 471 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF768Q9H5H4 540 aaKnown RBP10.35□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF701Q9NV72 531 aaPredicted RBP10.35□□□□□ -0.75
ITSN1-211ENST00000399355 B3GNT2Q9NY97 397 aa10.35□□□□□ -0.75
ITSN1-211ENST00000399355 USF3Q68DE3 2245 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 OTOGLQ3ZCN5 2332 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 C5orf51A6NDU8 294 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 OR5H14A6NHG9 310 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 B4GALT1P15291 398 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 GALNSP34059 522 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 P2RY4P51582 365 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 AKIRIN2Q53H80 203 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 TMEM71Q6P5X7 295 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 RRNAD1Q96FB5 475 aaKnown RBP10.34□□□□□ -0.75
ITSN1-211ENST00000399355 REEP6Q96HR9 211 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 TRAF4Q9BUZ4 470 aaPredicted RBP10.34□□□□□ -0.75
ITSN1-211ENST00000399355 ZNF471Q9BX82 626 aaPredicted RBP10.34□□□□□ -0.75
ITSN1-211ENST00000399355 B3GALT1Q9Y5Z6 326 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 A0A0B4J2A0 478 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 UBE2QL1A1L167 161 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 TRAPPC6AO75865 159 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 STK17BO94768 372 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 HOXB5P09067 269 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 CELA3AP09093 270 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 PGA4P0DJD7 388 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 PGA3P0DJD8 388 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 IL13RA1P78552 427 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 UBE2V2Q15819 145 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 RSPO1Q2MKA7 263 aaPredicted RBP10.34□□□□□ -0.75
ITSN1-211ENST00000399355 EMC4Q5J8M3 183 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 WDR45BQ5MNZ6 344 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 OR5AS1Q8N127 324 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 OR1M1Q8NGA1 313 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 RBPMSQ93062 196 aaKnown RBP10.34□□□□□ -0.75
ITSN1-211ENST00000399355 SRXN1Q9BYN0 137 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 CRIM1Q9NZV1 1036 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 SHPKQ9UHJ6 478 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 CHCHD2Q9Y6H1 151 aaPredicted RBP10.34□□□□□ -0.75
ITSN1-211ENST00000399355 CHD8Q9HCK8 2581 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 BDKRB2P30411 391 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 RNASE10Q5GAN6 216 aaKnown RBP10.34□□□□□ -0.75
ITSN1-211ENST00000399355 GSG1LQ6UXU4 331 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 C12orf45Q8N5I9 185 aaPredicted RBP10.34□□□□□ -0.75
ITSN1-211ENST00000399355 OR6M1Q8NGM8 313 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 UBALD1Q8TB05 177 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 IFI44Q8TCB0 444 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 RNF133Q8WVZ7 376 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 CPNE2Q96FN4 548 aaPredicted RBP10.34□□□□□ -0.75
ITSN1-211ENST00000399355 REG4Q9BYZ8 158 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 SMIM3Q9BZL3 60 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 GPR173Q9NS66 373 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 MBD2Q9UBB5 411 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 MED13LQ71F56 2210 aa10.34□□□□□ -0.75
ITSN1-211ENST00000399355 HEATR1Q9H583 2144 aaKnown RBP10.33□□□□□ -0.76
ITSN1-211ENST00000399355 OR14I1A6ND48 311 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 MSTNO14793 375 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 MT-ATP6P00846 226 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 ACKR3P25106 362 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 DRAM2Q6UX65 266 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 VPS13CQ709C8 3753 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 CSMD2Q7Z408 3487 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 APC2O95996 2303 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 A0A096LPE4 126 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 FAM230AA0A1W2PPH8 454 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 A0A1W2PPZ6 126 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 ANKUB1A6NFN9 424 aa10.33□□□□□ -0.76
ITSN1-211ENST00000399355 IFNA7P01567 189 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms