RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 IGHV7-4-1A0A0J9YVY3 117 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 SPRR5A0A1B0GTR4 108 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 SYCE1LA8MT33 242 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 H3BN98 237 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 MAGEB4O15481 346 aaPredicted RBP1.58□□□□□ -2.16
CD47-203ENST00000398258 RBFOX2O43251 390 aaKnown RBP eCLIP1.58□□□□□ -2.16
CD47-203ENST00000398258 MPDU1O75352 247 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 VAMP5O95183 116 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 IGHV3-11P01762 117 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 RHOXF2BP0C7M4 288 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 LINC00869P0C866 280 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 C1GALT1C1LP0DN25 315 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 CD37P11049 281 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 MYL9P24844 172 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 POLR2IP36954 125 aaKnown RBP1.58□□□□□ -2.16
CD47-203ENST00000398258 CFHR2P36980 270 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 OPRK1P41145 380 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 CSKP41240 450 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 KIR3DL2P43630 455 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 NDUFA8P51970 172 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 CDKN2DP55273 166 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 ATP6V0D1P61421 351 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 LCN2P80188 198 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 PPIDQ08752 370 aaKnown RBP1.58□□□□□ -2.16
CD47-203ENST00000398258 SIGLEC14Q08ET2 396 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 PNOCQ13519 176 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 TFDP2Q14188 446 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 GABRA6Q16445 453 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 ZNF829Q3KNS6 432 aaPredicted RBP1.58□□□□□ -2.16
CD47-203ENST00000398258 ABCA11PQ4W5N1 156 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 SMUG1Q53HV7 270 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 MPV17L2Q567V2 206 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 RNASE13Q5GAN3 156 aaKnown RBP1.58□□□□□ -2.16
CD47-203ENST00000398258 C16orf87Q6PH81 154 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 SLC35D2Q76EJ3 337 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 OR2W3Q7Z3T1 314 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 VTCN1Q7Z7D3 282 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 UNC93AQ86WB7 457 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 ZNF547Q8IVP9 402 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 NKAIN4Q8IVV8 208 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 WDFY1Q8IWB7 410 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 DAW1Q8N136 415 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 ZNF321PQ8N8H1 164 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 SNX31Q8N9S9 440 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 NECAP1Q8NC96 275 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 OR2L8Q8NGY9 312 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 CIRBP-AS1Q8TBR5 109 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 CA5BP1Q8WTZ4 195 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 ISOC2Q96AB3 205 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 APH1AQ96BI3 265 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 RCN3Q96D15 328 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 STARD4Q96DR4 205 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 ZNF488Q96MN9 340 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 ZNF382Q96SR6 550 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 RBBP8Q99708 897 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 UQCC2Q9BRT2 126 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 GGTLC1Q9BX51 225 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 C1orf198Q9H425 327 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 FBXO44Q9H4M3 255 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 MYOZ1Q9NP98 299 aaPredicted RBP1.58□□□□□ -2.16
CD47-203ENST00000398258 EXOSC4Q9NPD3 245 aaKnown RBP1.58□□□□□ -2.16
CD47-203ENST00000398258 ZDHHC4Q9NPG8 344 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 CHRAC1Q9NRG0 131 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 RGS18Q9NS28 235 aa1.58□□□□□ -2.16
CD47-203ENST00000398258 IGKV2-28A0A075B6P5 120 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 IGKV1-27A0A075B6S5 117 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 A0A1W2PRF3 423 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 A0A1W2PRM7 423 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 LINC01619G3V211 115 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 H0YC42 278 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 HSBP1O75506 76 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 CCNE2O96020 404 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 IGKV2D-28P01615 120 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 CATP04040 527 aaKnown RBP1.57□□□□□ -2.16
CD47-203ENST00000398258 GABRR2P28476 465 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 PCK1P35558 622 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 AP1S2P56377 157 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 YWHAEP62258 255 aaKnown RBP1.57□□□□□ -2.16
CD47-203ENST00000398258 CDK5Q00535 292 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 RPL18AQ02543 176 aaKnown RBP1.57□□□□□ -2.16
CD47-203ENST00000398258 ZNF816Q0VGE8 651 aaPredicted RBP1.57□□□□□ -2.16
CD47-203ENST00000398258 MOBPQ13875 183 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 ZNF266Q14584 549 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 SAXO2Q658L1 398 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 ASCL4Q6XD76 172 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 RTL4Q6ZR62 310 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 SNX20Q7Z614 316 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 KIF2BQ8N4N8 673 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 TRAM1L1Q8N609 369 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 GATSQ8NAP1 163 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 UBAC2Q8NBM4 344 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 GPR26Q8NDV2 337 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 OR4M1Q8NGD0 313 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 OR5T3Q8NGG3 340 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 LILRB4Q8NHJ6 448 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 LINC01560Q8TB33 94 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 ASZ1Q8WWH4 475 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 NEURL3Q96EH8 262 aa1.57□□□□□ -2.16
CD47-203ENST00000398258 RNF5Q99942 180 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms