RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 CNTNAP3Q9BZ76 1288 aa13.35□□□□□ -0.27
CTNS-202ENST00000381870 FAM212BQ9NTI7 297 aaPredicted RBP13.35□□□□□ -0.27
CTNS-202ENST00000381870 URGCP-MRPS24S4R325 110 aa13.35□□□□□ -0.27
CTNS-202ENST00000381870 LOC101059948A0A1B0GTJ6 334 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 A0A1B0GWJ7 208 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 LOC390937A0A1W2PQ73 354 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 ASAH2BP0C7U1 165 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 CAMLGP49069 296 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 EGR4Q05215 589 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 DHCR24Q15392 516 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 ZNF141Q15928 474 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 RPUSD3Q6P087 351 aaKnown RBP13.34□□□□□ -0.27
CTNS-202ENST00000381870 GPBAR1Q8TDU6 330 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 Q8WTZ3 238 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 KTI12Q96EK9 354 aaPredicted RBP13.34□□□□□ -0.27
CTNS-202ENST00000381870 DEFB118Q96PH6 123 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 RNF208Q9H0X6 261 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 EMC9Q9Y3B6 208 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 LRP12Q9Y561 859 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 LOC107986453A0A1B0GWG9 222 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 MEGF11A6BM72 1044 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 MASP2O00187 686 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 FOXS1O43638 330 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 IFNA10P01566 189 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 GAPDHP04406 335 aaKnown RBP13.34□□□□□ -0.27
CTNS-202ENST00000381870 SNRPCP09234 159 aaKnown RBP13.34□□□□□ -0.27
CTNS-202ENST00000381870 DANCRP0C864 163 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 VSIG8P0DPA2 414 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 FABP4P15090 132 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 GLRA1P23415 457 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 RABIFP47224 123 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 LHX8Q68G74 356 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 SLC18B1Q6NT16 456 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 COMMD1Q8N668 190 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 DTWD2Q8NBA8 298 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 ZNF524Q96C55 264 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 SPACA7Q96KW9 195 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 ZNF558Q96NG5 402 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 OR2A5Q96R48 311 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 DUSP15Q9H1R2 295 aaPredicted RBP13.34□□□□□ -0.27
CTNS-202ENST00000381870 C8orf33Q9H7E9 229 aaPredicted RBP13.34□□□□□ -0.27
CTNS-202ENST00000381870 MRPL22Q9NWU5 206 aaKnown RBP13.34□□□□□ -0.27
CTNS-202ENST00000381870 HS3ST3B1Q9Y662 390 aa13.34□□□□□ -0.27
CTNS-202ENST00000381870 ZNF587BE7ETH6 402 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 CYR61O00622 381 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 PPP1R2P9O14990 202 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 PRKNO60260 465 aaPredicted RBP13.33□□□□□ -0.28
CTNS-202ENST00000381870 ZNF217O75362 1048 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 CCR4P51679 360 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 HSD11B2P80365 405 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 ZNF77Q15935 545 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 HNRNPA1L2Q32P51 320 aaKnown RBP13.33□□□□□ -0.28
CTNS-202ENST00000381870 NPSR1Q6W5P4 371 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 DEFB128Q7Z7B8 93 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 TM4SF19Q96DZ7 209 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 RARRES2Q99969 163 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 C19orf12Q9NSK7 152 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 PILRAQ9UKJ1 303 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 SLC5A6Q9Y289 635 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 SERINC4A6NH21 518 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 RPL36A-HNRNPH2H7BZ11 118 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 SLC2A1P11166 492 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 TBPP20226 339 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 ZP2Q05996 745 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 ELAVL3Q14576 367 aaKnown RBP13.33□□□□□ -0.28
CTNS-202ENST00000381870 USF2Q15853 346 aaPredicted RBP13.33□□□□□ -0.28
CTNS-202ENST00000381870 OPN5Q6U736 354 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 OR52N4Q8NGI2 321 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 LCN9Q8WX39 176 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 C8orf44Q96CB5 159 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 CUTCQ9NTM9 273 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 HHLA2Q9UM44 414 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 WASF3Q9UPY6 502 aa13.33□□□□□ -0.28
CTNS-202ENST00000381870 TGIF2-C20orf24A0A0A6YYL0 155 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 C11orf98E9PRG8 122 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 OR6A2O95222 327 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 C5AR1P21730 350 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 CHATP28329 748 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 PPP1CCP36873 323 aaKnown RBP13.32□□□□□ -0.28
CTNS-202ENST00000381870 GABRA4P48169 554 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 QRFPP83859 136 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 ELOBQ15370 118 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 ZNHIT3Q15649 155 aaPredicted RBP13.32□□□□□ -0.28
CTNS-202ENST00000381870 PCK2Q16822 640 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 IAH1Q2TAA2 248 aaPredicted RBP13.32□□□□□ -0.28
CTNS-202ENST00000381870 EMC4Q5J8M3 183 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 MAMDC2Q7Z304 686 aaPredicted RBP13.32□□□□□ -0.28
CTNS-202ENST00000381870 ATG4DQ86TL0 474 aaPredicted RBP13.32□□□□□ -0.28
CTNS-202ENST00000381870 KDM8Q8N371 416 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 RSC1A1Q92681 617 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 HOXB13Q92826 284 aaPredicted RBP13.32□□□□□ -0.28
CTNS-202ENST00000381870 ANKRD9Q96BM1 317 aaPredicted RBP13.32□□□□□ -0.28
CTNS-202ENST00000381870 KLHDC3Q9BQ90 382 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 ABHD6Q9BV23 337 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 SRMSQ9H3Y6 488 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 PTGES2Q9H7Z7 377 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 OR5H15A6NDH6 313 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 OR5H1A6NKK0 313 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 GNRH1P01148 92 aa13.32□□□□□ -0.28
CTNS-202ENST00000381870 TRGC2P03986 189 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms