RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZNF75AQ96N20 296 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 PRSS27Q9BQR3 290 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 SHARPINQ9H0F6 387 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 GPR160Q9UJ42 338 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 TTC3P53804 2025 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 GPR31O00270 319 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 HTRA3P83110 453 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 NR0B2Q15466 257 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 Q5BKY6 102 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 AADACL3Q5VUY0 350 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 NOXO1Q8NFA2 376 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 ARSGQ96EG1 525 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 MS4A7Q9GZW8 240 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-202ENST00000377865 CHST6Q9GZX3 395 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 CD207Q9UJ71 328 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 OR7C1O76099 320 aaPredicted RBP7.88□□□□□ -1.15
PCDH9-202ENST00000377865 HPP00738 406 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 RPS27P42677 84 aaKnown RBP7.88□□□□□ -1.15
PCDH9-202ENST00000377865 OR2B8PP59922 312 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 CATR1Q13166 79 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 MIDNQ504T8 468 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 OR52W1Q6IF63 320 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 OR11H4Q8NGC9 324 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 SGCZQ96LD1 299 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 OXGR1Q96P68 337 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 PLEKHF2Q9H8W4 249 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 ING1Q9UK53 422 aaPredicted RBP7.88□□□□□ -1.15
PCDH9-202ENST00000377865 RCL1Q9Y2P8 373 aaKnown RBP7.88□□□□□ -1.15
PCDH9-202ENST00000377865 A0A1W2PPV4 95 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 CD63P08962 238 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 VSIG10L2P0DP72 767 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 NQO2P16083 231 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 GALNSP34059 522 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 CCR5P51681 352 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 RAB4BP61018 213 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 FUT5Q11128 374 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 PCK2Q16822 640 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 LHX8Q68G74 356 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 TFAP2EQ6VUC0 442 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 SLC16A14Q7RTX9 510 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 LRRTM1Q86UE6 522 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 MRGPRX4Q96LA9 322 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 ZNF98A6NK75 572 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 SCAF4O95104 1147 aaKnown RBP7.88□□□□□ -1.15
PCDH9-202ENST00000377865 NTN1O95631 604 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 FGF2P09038 288 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 POU2F2P09086 479 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 ST6GAL1P15907 406 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 RBP2P50120 134 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 CATSPERDQ86XM0 798 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 SOSTQ9BQB4 213 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 PLEKHA3Q9HB20 300 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 PCDHGA5Q9Y5G8 931 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 A0A0B4J293 547 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 A0A1B0GTQ1 180 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 OR4C45A6NMZ5 311 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 MFNGO00587 321 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 ZGLP1P0C6A0 271 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 SDHBP21912 280 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 PIGPP57054 158 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 MITD1Q8WV92 249 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 PIK3IP1Q96FE7 263 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 PARP12Q9H0J9 701 aaKnown RBP7.88□□□□□ -1.15
PCDH9-202ENST00000377865 SLC35B3Q9H1N7 401 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 NPDC1Q9NQX5 325 aaPredicted RBP7.88□□□□□ -1.15
PCDH9-202ENST00000377865 FBXO34Q9NWN3 711 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 LPAR3Q9UBY5 353 aa7.88□□□□□ -1.15
PCDH9-202ENST00000377865 NSG1A0A0A6YYJ2 146 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 TRBV5-5A0A0J9YX44 114 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 AP4M1O00189 453 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 SDCBPO00560 298 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-202ENST00000377865 CYB5BO43169 146 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 VAMP5O95183 116 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 CA3P07451 260 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 HOXD4P09016 255 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-202ENST00000377865 OR5H8P0DN80 308 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 NME1P15531 152 aaKnown RBP7.87□□□□□ -1.15
PCDH9-202ENST00000377865 PAX6P26367 422 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 CAPZBP47756 277 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 CRYBA2P53672 197 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 RAB11AP62491 216 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 LSM11P83369 360 aaKnown RBP eCLIP7.87□□□□□ -1.15
PCDH9-202ENST00000377865 IL13RA2Q14627 380 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 ADIRFQ15847 76 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 NKAIN2Q5VXU1 208 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 ZNF660Q6AZW8 331 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-202ENST00000377865 CORO6Q6QEF8 472 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 UNQ9370/PRO34162Q6UXP9 181 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 TECTBQ96PL2 329 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 GAS2L1Q99501 681 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-202ENST00000377865 PARP11Q9NR21 331 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 ELOA3CA0A087WX78 387 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-202ENST00000377865 TRAV20A0A0B4J274 112 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 ABHD16AO95870 558 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 METTL15P1P0C7V9 234 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 POU3F2P20265 443 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-202ENST00000377865 FAM199XQ6PEV8 388 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-202ENST00000377865 TMPPEQ6ZT21 453 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 PP6455Q8WZ26 134 aa7.87□□□□□ -1.15
PCDH9-202ENST00000377865 KCNIP2Q9NS61 270 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms