RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 FOXS1O43638 330 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 MYOGP15173 224 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 FSTP19883 344 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 GABRA4P48169 554 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 ERVFRD-1P60508 538 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 FAM3AP98173 230 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 ELOBQ15370 118 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 C1orf100Q5SVJ3 147 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 ZNF385CQ66K41 422 aaPredicted RBP13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 ADAMTSL4Q6UY14 1074 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 ATG101Q9BSB4 218 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 SLC5A6Q9Y289 635 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 LOC101059948A0A1B0GTJ6 334 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 OR5H15A6NDH6 313 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 OR5H1A6NKK0 313 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 NUDT21O43809 227 aaKnown RBP13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 DANCRP0C864 163 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 LMO1P25800 156 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 RABIFP47224 123 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 C5orf24Q7Z6I8 188 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 LCN9Q8WX39 176 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 GRHPRQ9UBQ7 328 aa13.95□□□□□ -0.18
CSNK1A1-202ENST00000377843 ZNF587BE7ETH6 402 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 K7EPK0 472 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 PPP1R2P9O14990 202 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 TRGC2P03986 189 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 RPS2P15880 293 aaKnown RBP13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 PPP1CCP36873 323 aaKnown RBP13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 GRK6P43250 576 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 RPL18Q07020 188 aaKnown RBP13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 SRSF5Q13243 272 aaKnown RBP13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 NNATQ16517 81 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 FAM71E2Q8N5Q1 922 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 NICN1Q9BSH3 213 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 PTGES2Q9H7Z7 377 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 MBNL1Q9NR56 388 aaKnown RBP13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 GDE1Q9NZC3 331 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 TRANK1O15050 2925 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 HEATR5AQ86XA9 2040 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 JTBO76095 146 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 PRNPP04156 253 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 GAPDHP04406 335 aaKnown RBP13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 QDPRP09417 244 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 IL2RGP31785 369 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 CLDN6P56747 220 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 NUTF2P61970 127 aaKnown RBP13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 USF2Q15853 346 aaPredicted RBP13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 RPUSD3Q6P087 351 aaKnown RBP13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 FBXO42Q6P3S6 717 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 RNF144BQ7Z419 303 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 DPPA2Q7Z7J5 298 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 CATSPERDQ86XM0 798 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 KLHDC3Q9BQ90 382 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 CNTNAP3Q9BZ76 1288 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 SH3BGRL3Q9H299 93 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 WFDC1Q9HC57 220 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 LRIT1Q9P2V4 623 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 TMEM14AQ9Y6G1 99 aa13.94□□□□□ -0.18
CSNK1A1-202ENST00000377843 ARID1BQ8NFD5 2236 aaPredicted RBP13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 HIDE1A8MVS5 230 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 HRKO00198 91 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 EREGO14944 169 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 TXNDC12O95881 172 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 ADH1CP00326 375 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 HLA-DQA2P01906 255 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 SMIM10L1P0DMW3 83 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 C5AR1P21730 350 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 GLRA1P23415 457 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 CMPK1P30085 196 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 RNF4P78317 190 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 QRFPP83859 136 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 UBE2V2Q15819 145 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 DNLZQ5SXM8 178 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 C7orf61Q8IZ16 206 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 ZNF101Q8IZC7 436 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 OR13C3Q8NGS6 347 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 OR4C3Q8NH37 302 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 THRSPQ92748 146 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 PTX4Q96A99 478 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 SMIM10Q96HG1 83 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 WDR92Q96MX6 357 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 SERINC2Q96SA4 455 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 G6PC3Q9BUM1 346 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 SRMSQ9H3Y6 488 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 C19orf12Q9NSK7 152 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 FAM212BQ9NTI7 297 aaPredicted RBP13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 RAB22AQ9UL26 194 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 INSL6Q9Y581 213 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 FANCMQ8IYD8 2048 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 IGLON5A6NGN9 336 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 MKRN2OSH3BPM6 223 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 VSIG8P0DPA2 414 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 G0S2P27469 103 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 TLX1P31314 330 aaPredicted RBP13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 CAMLGP49069 296 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 DNASE1L1P49184 302 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 NUBP1P53384 320 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 EGR4Q05215 589 aa13.93□□□□□ -0.18
CSNK1A1-202ENST00000377843 SFTPA1Q8IWL2 248 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms