RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ST3GAL6Q9Y274 331 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 EXOGQ9Y2C4 368 aaKnown RBP12.24□□□□□ -0.45
C9orf47-203ENST00000375851 A8MXE2 369 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 WDR1O75083 606 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 SERPINF1P36955 418 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 NKX2-1P43699 371 aaPredicted RBP12.23□□□□□ -0.45
C9orf47-203ENST00000375851 HAAOP46952 286 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 UBE2IP63279 158 aaKnown RBP12.23□□□□□ -0.45
C9orf47-203ENST00000375851 MARCH1Q8TCQ1 289 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 PP6455Q8WZ26 134 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 TSPAN32Q96QS1 320 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 FSCN3Q9NQT6 498 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 SPTBN2O15020 2390 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 MKRN2OSH3BPM6 223 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 TOX3O15405 576 aaPredicted RBP12.23□□□□□ -0.45
C9orf47-203ENST00000375851 TBPP20226 339 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 GALP22466 123 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 RPL35P42766 123 aaKnown RBP12.23□□□□□ -0.45
C9orf47-203ENST00000375851 FABP6P51161 128 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 Q7L0L9 218 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 EGLN1Q9GZT9 426 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 CNOT1A5YKK6 2376 aaKnown RBP12.23□□□□□ -0.45
C9orf47-203ENST00000375851 LINC01387J3KSC0 135 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 HBE1P02100 147 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 CD226Q15762 336 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 CST9LP1Q5W188 147 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 C17orf47Q8NEP4 570 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 DOK1Q99704 481 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 EXOSC3Q9NQT5 275 aaKnown RBP12.23□□□□□ -0.45
C9orf47-203ENST00000375851 SLC39A9Q9NUM3 307 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 FOXJ3Q9UPW0 622 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 PUS1Q9Y606 427 aaKnown RBP eCLIP12.23□□□□□ -0.45
C9orf47-203ENST00000375851 NKX6-3A6NJ46 265 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 RER1O15258 196 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 OR4E1P0C645 316 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 TIGD3Q6B0B8 471 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 SFTPA2Q8IWL1 248 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 ZDHHC23Q8IYP9 409 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 EXD3Q8N9H8 876 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 OR2AK2Q8NG84 335 aa12.23□□□□□ -0.45
C9orf47-203ENST00000375851 A0A1B0GTH9 108 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 A0A1B0GUH1 482 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 LRP5LA4QPB2 252 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 SIRPB1O00241 398 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 SH2D1BO14796 132 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 ANGPTL7O43827 346 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 NDUFB7P17568 137 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 HOXA1P49639 335 aaPredicted RBP12.22□□□□□ -0.45
C9orf47-203ENST00000375851 AGFG1P52594 562 aaKnown RBP12.22□□□□□ -0.45
C9orf47-203ENST00000375851 GUCA2AQ02747 115 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 TLE4Q04727 773 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 FZD5Q13467 585 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 ZNF468Q5VIY5 522 aaPredicted RBP12.22□□□□□ -0.45
C9orf47-203ENST00000375851 ZAR1Q86SH2 424 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 DEFB108BQ8NET1 73 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 SCARB1Q8WTV0 552 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 CDX2Q99626 313 aaPredicted RBP12.22□□□□□ -0.45
C9orf47-203ENST00000375851 SERTAD4Q9NUC0 356 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 FLRT3Q9NZU0 649 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 R4GN57 208 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 ALPK2Q86TB3 2170 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 ZNF816-ZNF321PA0A0X1KG74 233 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 HRKO00198 91 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 CTLA4P16410 223 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 GZMKP49863 264 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 SPEM2Q0P670 501 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 ESCO2Q56NI9 601 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 TRILQ7L0X0 811 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 ARHGEF39Q8N4T4 335 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 OR1F12Q8NHA8 337 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 TNS1Q9HBL0 1735 aaKnown RBP12.22□□□□□ -0.45
C9orf47-203ENST00000375851 MEIKINA0A087WXM9 373 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 EPPINO95925 133 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 FCGR2CP31995 323 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 ARL3P36405 182 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 AKR1C1Q04828 323 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 BAMBIQ13145 260 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 DEGS2Q6QHC5 323 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 OR13C8Q8NGS7 320 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 TCTEX1D2Q8WW35 142 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 C12orf10Q9HB07 376 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 ZFP64Q9NPA5 681 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 TRAPPC4Q9Y296 219 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 CSAG2Q9Y5P2 127 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 TRGV5A0A0B4J1U4 118 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 OR5H14A6NHG9 310 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 SNRPGP15A8MWD9 76 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 TPPPO94811 219 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 PDGFAP04085 211 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 AADACP22760 399 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 PSMB6P28072 239 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 MAGEB1P43366 347 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 BAXQ07812 192 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 C1QL3Q5VWW1 255 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 VASH2Q86V25 355 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 HIPK2Q9H2X6 1198 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 CACNA1EQ15878 2313 aa12.22□□□□□ -0.45
C9orf47-203ENST00000375851 CYB5BO43169 146 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 NTN1O95631 604 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 PTHLHP12272 177 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms