RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 FABP4P15090 132 aa12.09□□□□□ -0.47
RAPGEF1-201ENST00000372189 COMPP49747 757 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF1-201ENST00000372189 SULT1A1P50225 295 aa12.09□□□□□ -0.47
RAPGEF1-201ENST00000372189 RAB1AP62820 205 aa12.09□□□□□ -0.47
RAPGEF1-201ENST00000372189 AADACL3Q5VUY0 350 aa12.09□□□□□ -0.47
RAPGEF1-201ENST00000372189 ZNF738Q8NE65 137 aa12.09□□□□□ -0.47
RAPGEF1-201ENST00000372189 SLC39A9Q9NUM3 307 aa12.09□□□□□ -0.47
RAPGEF1-201ENST00000372189 HRO43593 1189 aa12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 PEX11BO96011 259 aa12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 CD14P08571 375 aa12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 CLDN20P56880 219 aa12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 SRSF5Q13243 272 aaKnown RBP12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 DHRS4L2Q6PKH6 230 aa12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 BHLHA9Q7RTU4 235 aa12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 RIMKLAQ8IXN7 391 aa12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 SMOC1Q9H4F8 434 aa12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 TAF9BQ9HBM6 251 aa12.08□□□□□ -0.47
RAPGEF1-201ENST00000372189 A0A087WV62 115 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 TEX50A0A1B0GTY4 177 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 HMGN4O00479 90 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 TNFSF14O43557 240 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 HEXAP06865 529 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 BCKDHBP21953 392 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 CATR1Q13166 79 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 RUNX2Q13950 521 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 TMPRSS11FQ6ZWK6 438 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR51S1Q8NGJ8 323 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR8U1Q8NH10 309 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 C16orf52Q8NHV5 167 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 DCLRE1CQ96SD1 692 aaKnown RBP12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 VCX2Q9H322 139 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 HAO2Q9NYQ3 351 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 ANKRD31Q8N7Z5 1873 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 COL4A1P02462 1669 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 MAP2K6P52564 334 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 ETFDHQ16134 617 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 HSD17B8Q92506 261 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 BOD1Q96IK1 185 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 RSG1Q9BU20 258 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 CHST11Q9NPF2 352 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR1A1Q9P1Q5 309 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 PPM1DO15297 605 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 GALP22466 123 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 NFYBP25208 207 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 SELENBP1Q13228 472 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 ATP6V1FQ16864 119 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 GLYATL3Q5SZD4 288 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 LINC00346Q8IVM7 164 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 GPBAR1Q8TDU6 330 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 SGK494Q96LW2 274 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZNF629Q9UEG4 869 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 OSGIN2Q9Y236 505 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 FRG2CA6NGY1 282 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 C5orf52A6NGY3 159 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZAR1LA6NP61 321 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 VAMP5O95183 116 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 IGHV3-9P01782 118 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 NID1P14543 1247 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 CD81P60033 236 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 AKR1C1Q04828 323 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR8B8Q15620 311 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 PFN4Q8NHR9 129 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 MAP6Q96JE9 813 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 CSF3RQ99062 836 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 TAF1LQ8IZX4 1826 aa12.08□□□□□ -0.48
RAPGEF1-201ENST00000372189 A0A1W2PPH5 198 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 P2RY10O00398 339 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 BET1O15155 118 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 NAXDQ8IW45 347 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 NUP37Q8NFH4 326 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 PRR14Q9BWN1 585 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 SDK1Q7Z5N4 2213 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 NPY1RP25929 384 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 IL2RGP31785 369 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 SNTB1Q13884 538 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 Q6ZN92 141 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 OR1S2Q8NGQ3 325 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 P4HTMQ9NXG6 502 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 MIOXQ9UGB7 285 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 NKX6-3A6NJ46 265 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 MCRIP1C9JLW8 97 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 DOK2O60496 412 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 SELENOFO60613 162 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 POU3F3P20264 500 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 DTYMKP23919 212 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 RPL27P61353 136 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 GJC3Q8NFK1 279 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 B3GAT1Q9P2W7 334 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 ASB1Q9Y576 335 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 TAAR5O14804 337 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 ZNF93P35789 620 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 RPS23P62266 143 aaKnown RBP12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 CDK5Q00535 292 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 IHHQ14623 411 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 RNLSQ5VYX0 342 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 C15orf54Q8N8G6 183 aa12.07□□□□□ -0.48
RAPGEF1-201ENST00000372189 ALG14Q96F25 216 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms