RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 EXTL1Q92935 676 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 IMMP1LQ96LU5 166 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 C12orf57Q99622 126 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 PHB2Q99623 299 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 NUDT16L1Q9BRJ7 211 aaKnown RBP10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 OR8D2Q9GZM6 311 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 FKRPQ9H9S5 495 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 MMP25Q9NPA2 562 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 MMP26Q9NRE1 261 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 ZFP57Q9NU63 452 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 LAMA5O15230 3695 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 ACACAQ13085 2346 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 TEX13DA0A0J9YY54 714 aaPredicted RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 LOC390937A0A1W2PQ73 354 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 OR2AT4A6NND4 320 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 F5H0A9 414 aaPredicted RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 HRKO00198 91 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 HLA-AP01891 365 aaKnown RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 FOLR2P14207 255 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 ITGA3P26006 1051 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 HTR2CP28335 458 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 GSK3AP49840 483 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 SLC26A5P58743 744 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 TAS2R31P59538 309 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 TBR1Q16650 682 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 KLHL26Q53HC5 615 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 C1orf100Q5SVJ3 147 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 AWAT2Q6E213 333 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 TMED4Q7Z7H5 227 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 BIVMQ86UB2 503 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 ZNF679Q8IYX0 411 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 NKAIN3Q8N8D7 197 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 ZNF321PQ8N8H1 164 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 OR5AP2Q8NGF4 316 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 OR13C8Q8NGS7 320 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 OR8S1Q8NH09 359 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 PPP1R1CQ8WVI7 109 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 DAZLQ92904 295 aaKnown RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 PIK3IP1Q96FE7 263 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 THOC3Q96J01 351 aaKnown RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 USB1Q9BQ65 265 aaKnown RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 DHDHQ9UQ10 334 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 CFAP47Q6ZTR5 3102 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 A0A0B4J2A0 478 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 H0YC42 278 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 CX3CR1P49238 355 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 MEOX2P50222 304 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 EIF5AP63241 154 aaKnown RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 AIMP2Q13155 320 aaKnown RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 TMEM225Q6GV28 225 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 KCTD18Q6PI47 426 aaPredicted RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 ZNF584Q8IVC4 421 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 NFAM1Q8NET5 270 aaPredicted RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 GLYATL2Q8WU03 294 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 DVL3Q92997 716 aaPredicted RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 SAT2Q96F10 170 aaPredicted RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 ZNF75AQ96N20 296 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 NMES1Q9C002 83 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 TINAGL1Q9GZM7 467 aaPredicted RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 PRORYQ9H606 182 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 SHPKQ9UHJ6 478 aa10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 ZNF230Q9UIE0 474 aaPredicted RBP10.18□□□□□ -0.78
TSPAN1-201ENST00000372003 C9orf170A2RU37 121 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 METTL21EPA6NDL7 271 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 TVP23AA6NH52 213 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 FAM171A2A8MVW0 826 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 GPR31O00270 319 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 GNB5O14775 395 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 AKR7A3O95154 331 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 DUS4LO95620 317 aaKnown RBP10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 DDAH2O95865 285 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 LYL1P12980 280 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 ABOP16442 354 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 PSMB6P28072 239 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 GALNSP34059 522 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 SLC6A9P48067 706 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 ADAM8P78325 824 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 BLOC1S1P78537 153 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 PJVKQ0ZLH3 352 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 PMPCAQ10713 525 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 EXT1Q16394 746 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 MESTQ5EB52 335 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 RNASE10Q5GAN6 216 aaKnown RBP10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 AVPI1Q5T686 147 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 FNDC7Q5VTL7 733 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 SLC18B1Q6NT16 456 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 BAP18Q8IXM2 172 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 OR10AC1Q8NH08 325 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 M1APQ8TC57 530 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 THAP3Q8WTV1 239 aaPredicted RBP10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 AQP3Q92482 292 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 TSPAN32Q96QS1 320 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 NUDT9Q9BW91 350 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 RNF122Q9H9V4 155 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 ELOVL3Q9HB03 270 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 SRA1Q9HD15 236 aaKnown RBP10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 ASF1BQ9NVP2 202 aa10.17□□□□□ -0.78
TSPAN1-201ENST00000372003 PCSK5Q92824 1860 aa10.16□□□□□ -0.78
TSPAN1-201ENST00000372003 TRBV11-1A0A0K0K1C0 115 aa10.16□□□□□ -0.78
TSPAN1-201ENST00000372003 DBX1A6NMT0 343 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms