RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 NDUFA13Q9P0J0 144 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 HCFC1P51610 2035 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 HELZ2Q9BYK8 2649 aaKnown RBP9.44□□□□□ -0.9
BRCC3-204ENST00000369462 TRDV1A0A1B0GX56 115 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 WIPF3A6NGB9 483 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 A6NIN4 97 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 SC5DO75845 299 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 GABARAPO95166 117 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 SERPINA3P01011 423 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 EPXP11678 715 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 PCSK6P29122 969 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 TGFBR1P36897 503 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 TMBIM6P55061 237 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 BSPH1Q075Z2 132 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 SRSF1Q07955 248 aaKnown RBP eCLIP9.44□□□□□ -0.9
BRCC3-204ENST00000369462 SPOCK1Q08629 439 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 MALLQ13021 153 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 HLXQ14774 488 aaPredicted RBP9.44□□□□□ -0.9
BRCC3-204ENST00000369462 CTF1Q16619 201 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 Q499Y3 187 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 ZMAT1Q5H9K5 638 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 OR5L1Q8NGL2 311 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 OR1J1Q8NGS3 322 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 TMEM106AQ96A25 262 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 ISOC1Q96CN7 298 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 ORAI1Q96D31 301 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 PPIL3Q9H2H8 161 aaKnown RBP9.44□□□□□ -0.9
BRCC3-204ENST00000369462 TXNL4BQ9NX01 149 aaKnown RBP9.44□□□□□ -0.9
BRCC3-204ENST00000369462 ICE1Q9Y2F5 2266 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 ZNF879B4DU55 563 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 ATP6V1G2-DDX39BF2Z307 99 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 C19orf84I3L1E1 186 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 ABCD4O14678 606 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 XRCC2O43543 280 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 LMX1BO60663 402 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 IGLV3-1P01715 115 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 PLA2G2AP14555 144 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 RAD52P43351 418 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 ERVS71-1P61550 626 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 VBP1P61758 197 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 NCS1P62166 190 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 GK2Q14410 553 aaPredicted RBP9.44□□□□□ -0.9
BRCC3-204ENST00000369462 DOK3Q7L591 496 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 OR13C3Q8NGS6 347 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 RAB2BQ8WUD1 216 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 POFUT1Q9H488 388 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 RGCCQ9H4X1 137 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 PTTG3PQ9NZH4 202 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 DHDHQ9UQ10 334 aa9.44□□□□□ -0.9
BRCC3-204ENST00000369462 TRBV5-5A0A0J9YX44 114 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 ANKRD61A6NGH8 418 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 NOL3O60936 208 aaKnown RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 PPP1CBP62140 327 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 UNQ6126/PRO20091Q6UXV3 157 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 GDPGP1Q6ZNW5 385 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 PGAP1Q75T13 922 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 ZNF420Q8TAQ5 688 aaPredicted RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 DGCR14Q96DF8 476 aaKnown RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 DACH2Q96NX9 599 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 OR2J1Q9GZK6 312 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 RSL24D1Q9UHA3 163 aaKnown RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 ZNF391Q9UJN7 358 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 J3QW42 95 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 CASKO14936 926 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 GATBO75879 557 aaKnown RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 CCL1P22362 96 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 CALRP27797 417 aaKnown RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 FGF9P31371 208 aaPredicted RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 FAM3AP98173 230 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 MRPL21Q7Z2W9 205 aaKnown RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 PLPP7Q8NBV4 271 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 AKAP1Q92667 903 aaKnown RBP eCLIP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 SPSB4Q96A44 273 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 FGGYQ96C11 551 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 C12orf43Q96C57 262 aaKnown RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 PLPPR2Q96GM1 343 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 DERL3Q96Q80 235 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 BCL2L14Q9BZR8 327 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 ESRP2Q9H6T0 727 aaKnown RBP9.43□□□□□ -0.9
BRCC3-204ENST00000369462 NOX4Q9NPH5 578 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 GSTK1Q9Y2Q3 226 aa9.43□□□□□ -0.9
BRCC3-204ENST00000369462 UTP20O75691 2785 aaKnown RBP9.42□□□□□ -0.9
BRCC3-204ENST00000369462 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.42□□□□□ -0.9
BRCC3-204ENST00000369462 H3BMQ9 156 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 J3QKU1 62 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 MTRF1O75570 445 aaKnown RBP9.42□□□□□ -0.9
BRCC3-204ENST00000369462 DHRS3O75911 302 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 CD2P06729 351 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 GALP22466 123 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 ACKR3P25106 362 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 KIR2DL3P43628 341 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 GSK3AP49840 483 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 SNTB2Q13425 540 aaKnown RBP9.42□□□□□ -0.9
BRCC3-204ENST00000369462 TUSC1Q2TAM9 212 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 SLC22A25Q6T423 547 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 UNQ9370/PRO34162Q6UXP9 181 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 OR14K1Q8NGZ2 314 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 SLC25A40Q8TBP6 338 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 PLEKHA1Q9HB21 404 aa9.42□□□□□ -0.9
BRCC3-204ENST00000369462 ZNF275Q9NSD4 429 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms