RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ZDHHC11Q9H8X9 412 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 MRM2Q9UI43 246 aaKnown RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 MCTS1Q9ULC4 181 aaKnown RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 KLHDC2Q9Y2U9 406 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 SIRT4Q9Y6E7 314 aaPredicted RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 F8P00451 2351 aa7.67□□□□□ -1.18
TPM3-213ENST00000368545 SPTBN1Q01082 2364 aaKnown RBP7.67□□□□□ -1.18
TPM3-213ENST00000368545 ARPC4-TTLL3A0A0A6YYG9 625 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 IGKV1D-43A0A0B4J1Z2 117 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 ZNF716A6NP11 495 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 ZNF254O75437 659 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 UPK3AO75631 287 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 SC5DO75845 299 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 ZNF432O94892 652 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 SYNGR4O95473 234 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 QDPRP09417 244 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 OR8G3PP0DMU2 310 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 KLK2P20151 261 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 GUCA1AP43080 201 aaPredicted RBP7.66□□□□□ -1.18
TPM3-213ENST00000368545 CLDN15P56746 228 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 RASGEF1BQ0VAM2 473 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 LIPNQ5VXI9 398 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 CARD17Q5XLA6 110 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 DEGS2Q6QHC5 323 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 TMEM123Q8N131 208 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 OR6N1Q8NGY5 312 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 ST8SIA2Q92186 375 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 PHYHIPQ92561 330 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 NSMAFQ92636 917 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 THRSPQ92748 146 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 GHSRQ92847 366 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 TMEM54Q969K7 222 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 MBD6Q96DN6 1003 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 FOXN4Q96NZ1 517 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 ZNF385AQ96PM9 386 aaKnown RBP7.66□□□□□ -1.18
TPM3-213ENST00000368545 GCM1Q9NP62 436 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 HMG20AQ9NP66 347 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 CRNNQ9UBG3 495 aaPredicted RBP7.66□□□□□ -1.18
TPM3-213ENST00000368545 STEAP1Q9UHE8 339 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 GRIP1Q9Y3R0 1128 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 FLVCR1Q9Y5Y0 555 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 A0A075B6Q4 140 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 TRGV5A0A0B4J1U4 118 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 CD8B2A6NJW9 211 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 TMEM212A6NML5 194 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 PRR32B1ATL7 298 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 TEX22C9J3V5 150 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 GPR171O14626 319 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 CDRT1O95170 752 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 TMEM225BP0DP42 221 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 PSKH1P11801 424 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 ZNF24P17028 368 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 CFL1P23528 166 aaKnown RBP7.66□□□□□ -1.18
TPM3-213ENST00000368545 RPS27P42677 84 aaKnown RBP7.66□□□□□ -1.18
TPM3-213ENST00000368545 RIDAP52758 137 aaKnown RBP7.66□□□□□ -1.18
TPM3-213ENST00000368545 ALKBH1Q13686 389 aaKnown RBP7.66□□□□□ -1.18
TPM3-213ENST00000368545 MEP1BQ16820 701 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 YIF1BQ5BJH7 314 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 IGFL3Q6UXB1 125 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 TMEM91Q6ZNR0 172 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 RHOUQ7L0Q8 258 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 ZADH2Q8N4Q0 377 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 AP3S1Q92572 193 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 TMEM45BQ96B21 275 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 ABHD6Q9BV23 337 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 COMMD4Q9H0A8 199 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 EXO5Q9H790 373 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 EMC3Q9P0I2 261 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 PEX16Q9Y5Y5 336 aa7.66□□□□□ -1.18
TPM3-213ENST00000368545 TNRC6AQ8NDV7 1962 aaKnown RBP7.65□□□□□ -1.18
TPM3-213ENST00000368545 IGKV3D-15A0A087WSY6 115 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 IQCMA0A1B0GVH7 501 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 PSMD9O00233 223 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 CASKO14936 926 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 TFECO14948 347 aaPredicted RBP7.65□□□□□ -1.18
TPM3-213ENST00000368545 MAGEB4O15481 346 aaPredicted RBP7.65□□□□□ -1.18
TPM3-213ENST00000368545 LRRTM2O43300 516 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 ARL6IP5O75915 188 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 INHBBP09529 407 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 MYL9P24844 172 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 MAPK3P27361 379 aaPredicted RBP7.65□□□□□ -1.18
TPM3-213ENST00000368545 S100A5P33763 92 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 SDC2P34741 201 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 RPS19P39019 145 aaKnown RBP7.65□□□□□ -1.18
TPM3-213ENST00000368545 ZNF84P51523 738 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 LSM6P62312 80 aaKnown RBP7.65□□□□□ -1.18
TPM3-213ENST00000368545 LRRN1Q6UXK5 716 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 FOXL2NBQ6ZUU3 175 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 MED13LQ71F56 2210 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 DCXRQ7Z4W1 244 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 TPRA1Q86W33 373 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 C20orf196Q8IYI0 205 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 IZUMO1Q8IYV9 350 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 ZIC4Q8N9L1 334 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 OR6Q1Q8NGQ2 317 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 ST7LQ8TDW4 575 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 RNF128Q8TEB7 428 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 C11orf40Q8WZ69 217 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 ULBP2Q9BZM5 246 aa7.65□□□□□ -1.18
TPM3-213ENST00000368545 C6orf62Q9GZU0 229 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms