RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 A6NIZ1 184 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 CXCL13O43927 109 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 LMX1BO60663 402 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 SIX6O95475 246 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 CRYBA1P05813 215 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 QDPRP09417 244 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 SLC2A1P11166 492 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 ZNF823P16415 610 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 SDHBP21912 280 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 VAMP1P23763 118 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 NOVA1P51513 510 aaKnown RBP11.19□□□□□ -0.62
GGPS1-202ENST00000358966 RAP1BP61224 184 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 RAP1AP62834 184 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 AKIRIN2Q53H80 203 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 RNASE12Q5GAN4 147 aaKnown RBP11.19□□□□□ -0.62
GGPS1-202ENST00000358966 TEX30Q5JUR7 227 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 DTX1Q86Y01 620 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 CBLN2Q8IUK8 224 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 SULF2Q8IWU5 870 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 ST7LQ8TDW4 575 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 OXGR1Q96P68 337 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 PIGQQ9BRB3 760 aa11.19□□□□□ -0.62
GGPS1-202ENST00000358966 UTP23Q9BRU9 249 aaKnown RBP11.19□□□□□ -0.62
GGPS1-202ENST00000358966 ZNF879B4DU55 563 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 SMAD9O15198 467 aaKnown RBP11.18□□□□□ -0.62
GGPS1-202ENST00000358966 TXNL1O43396 289 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 IGHG1P01857 330 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 MAS1P04201 325 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 G0S2P27469 103 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 RBMS1P29558 406 aaKnown RBP11.18□□□□□ -0.62
GGPS1-202ENST00000358966 SRD5A2P31213 254 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 SLC35A1P78382 337 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 MTFR2Q6P444 385 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 ZNF679Q8IYX0 411 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 OR10S1Q8NGN2 331 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 OR52N5Q8NH56 324 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 TMEM106AQ96A25 262 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 RHOVQ96L33 236 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 DMRTA2Q96SC8 542 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 POLR1DQ9Y2S0 133 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 RELNP78509 3460 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 IGF2RP11717 2491 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 A0A087WZY1 265 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 RER1O15258 196 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 HLA-DQB1P01920 261 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 TACSTD2P09758 323 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 UCHL1P09936 223 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 SRMP19623 302 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 RAC1P63000 192 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 RIPPLY1Q0D2K3 151 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 IL18Q14116 193 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 HBMQ6B0K9 141 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 IZUMO1Q8IYV9 350 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 GALNT16Q8N428 558 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 RPS4Y2Q8TD47 263 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 ABHD3Q8WU67 409 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 AP3S1Q92572 193 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 MEGF10Q96KG7 1140 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 C4orf45Q96LM5 186 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 NEU1Q99519 415 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 KCNK15Q9H427 330 aa11.18□□□□□ -0.62
GGPS1-202ENST00000358966 SEBOXQ9HB31 216 aaPredicted RBP11.18□□□□□ -0.62
GGPS1-202ENST00000358966 ANXA2P2A6NMY6 339 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 CDRT15L2A8MXV6 281 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 KHDRBS3O75525 346 aaKnown RBP11.17□□□□□ -0.62
GGPS1-202ENST00000358966 PMS2P2O95744 297 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 IGHV3-9P01782 118 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 ADRA2CP18825 462 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 INPP1P49441 399 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 EGR3Q06889 387 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 GLB1L2Q8IW92 636 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 LRRC18Q8N456 261 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 OR10D3Q8NH80 312 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 TRMT10AQ8TBZ6 339 aaKnown RBP11.17□□□□□ -0.62
GGPS1-202ENST00000358966 C14orf144Q96I85 54 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 DMRT1Q9Y5R6 373 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 LHFPL6Q9Y693 200 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 TMEM14AQ9Y6G1 99 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 METTL21EPA6NDL7 271 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 ZNF726A6NNF4 738 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 NPIPA2E9PIF3 369 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 NPIPA3F8WFD2 350 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 RBBP9O75884 186 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 BTG1P62324 171 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 PMP22Q01453 160 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 AIMP2Q13155 320 aaKnown RBP11.17□□□□□ -0.62
GGPS1-202ENST00000358966 ZNF57Q68EA5 555 aaPredicted RBP11.17□□□□□ -0.62
GGPS1-202ENST00000358966 EIF4E3Q8N5X7 224 aaKnown RBP11.17□□□□□ -0.62
GGPS1-202ENST00000358966 DMBX1Q8NFW5 382 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 OR9K2Q8NGE7 335 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 TSEN15Q8WW01 171 aaKnown RBP11.17□□□□□ -0.62
GGPS1-202ENST00000358966 GCDHQ92947 438 aaPredicted RBP11.17□□□□□ -0.62
GGPS1-202ENST00000358966 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 DLL4Q9NR61 685 aa11.17□□□□□ -0.62
GGPS1-202ENST00000358966 EPXP11678 715 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 NR2C1P13056 603 aa11.16□□□□□ -0.62
GGPS1-202ENST00000358966 GALP22466 123 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms