RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CAPZA1P52907 286 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 GMFBP60983 142 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 RPS18P62269 152 aaKnown RBP13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 CDH26Q8IXH8 852 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 UBALD2Q8IYN6 164 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 PDCD10Q9BUL8 212 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 RBM24Q9BX46 236 aaKnown RBP13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 PROK2Q9HC23 129 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 RDH8Q9NYR8 311 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 ZNF224Q9NZL3 707 aa13.14□□□□□ -0.31
VIPAS39-202ENST00000343765 NSG1A0A0A6YYJ2 146 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 OR14I1A6ND48 311 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 FAM25EA8MYX2 175 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 TNFSF11O14788 317 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 STK17BO94768 372 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 LIFP15018 202 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 MEF2DQ14814 521 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 AANATQ16613 207 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 HIST3H3Q16695 136 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 TRIM61Q5EBN2 209 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 ZNF529Q6P280 563 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 BEST3Q8N1M1 668 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 ANGPTL6Q8NI99 470 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 CASTOR1Q8WTX7 329 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 MRGPRFQ96AM1 343 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 CCDC120Q96HB5 630 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 PRRT1Q99946 306 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 MFFQ9GZY8 342 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 ZNF700Q9H0M5 742 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 CST11Q9H112 138 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 HPF1Q9NWY4 346 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 TMEM14DPA8MWL7 114 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 SSX5O60225 188 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 CRTAPO75718 401 aaPredicted RBP13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 VAMP1P23763 118 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 PPP1R1AQ13522 171 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 ATXN7L3Q14CW9 347 aaPredicted RBP13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 EXT1Q16394 746 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 NHLRC3Q5JS37 347 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 RFPL4BQ6ZWI9 263 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 WDR5BQ86VZ2 330 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 CXorf58Q96LI9 332 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 LPAR5Q9H1C0 372 aa13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 NCOA6Q14686 2063 aaPredicted RBP13.13□□□□□ -0.31
VIPAS39-202ENST00000343765 TRAV14DV4A0A0A6YYC5 116 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 OR2AT4A6NND4 320 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 HMSDA8MTL9 139 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 ZIC3O60481 467 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 SPDEFO95238 335 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 IFNA6P05013 189 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 MELTFP08582 738 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 RRASP10301 218 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 AKR1C4P17516 323 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 MPPED2Q15777 294 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 FAM209AQ5JX71 171 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 CFAP47Q6ZTR5 3102 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 RPS19BP1Q86WX3 136 aaKnown RBP13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 LRRC20Q8TCA0 184 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 MICU1Q9BPX6 476 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 EDEM2Q9BV94 578 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 NARFLQ9H6Q4 476 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 PLEKHA6Q9Y2H5 1048 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 IGKV1-9A0A0C4DH69 117 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 A0A0G2JMM0 328 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 A0A1W2PPB8 328 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 A0A1W2PRS3 328 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 KIR3DP1A8MWS1 328 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 LAMTOR5O43504 91 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 DBHP09172 617 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 MSR1P21757 451 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 PLAC9Q5JTB6 97 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 GSG1LQ6UXU4 331 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 RHOUQ7L0Q8 258 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 ADAD2Q8NCV1 583 aaKnown RBP13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 ST8SIA4Q92187 359 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 ZNF837Q96EG3 531 aaPredicted RBP13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 TMEM59Q9BXS4 323 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 ANGPTL4Q9BY76 406 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 SLC39A1Q9NY26 324 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 COQ3Q9NZJ6 369 aa13.12□□□□□ -0.31
VIPAS39-202ENST00000343765 CCDC163A0A0D9SF12 145 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 ZSCAN5BA6NJL1 495 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 CDC14BO60729 498 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 CASRP41180 1078 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 DSCR4P56555 118 aaPredicted RBP13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 H3F3AP84243 136 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 IKZF1Q13422 519 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 CLPPQ16740 277 aaPredicted RBP13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 DOK3Q7L591 496 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 DTX1Q86Y01 620 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 OR2Y1Q8NGV0 311 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 OR10K1Q8NGX5 313 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 RAB3CQ96E17 227 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 LYZL4Q96KX0 146 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 A0A087WZY1 265 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 OR6C65A6NJZ3 312 aa13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 NTN3O00634 580 aaPredicted RBP13.11□□□□□ -0.31
VIPAS39-202ENST00000343765 OTX2P32243 289 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms