RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 HBG2P69892 147 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 RAB32Q13637 225 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 C4orf17Q53FE4 359 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 THEM4Q5T1C6 240 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 ARRDC1Q8N5I2 433 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 LURAP1Q96LR2 239 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 CHST6Q9GZX3 395 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 BCO1Q9HAY6 547 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 ZFP64Q9NPA5 681 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 GNG13Q9P2W3 67 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 STRAPQ9Y3F4 350 aaKnown RBP13.34□□□□□ -0.27
RRP1B-201ENST00000340648 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 FRG2CA6NGY1 282 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 CLDN1O95832 211 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 AADACP22760 399 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 UBE2NP61088 152 aaKnown RBP13.34□□□□□ -0.27
RRP1B-201ENST00000340648 MIDNQ504T8 468 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 ZNF425Q6IV72 752 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 FAM181AQ8N9Y4 354 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 C11orf40Q8WZ69 217 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 CYB5R1Q9UHQ9 305 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 CKAP5Q14008 2032 aa13.33□□□□□ -0.27
RRP1B-201ENST00000340648 SSSCA1O60232 199 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 NMBP08949 121 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 MSR1P21757 451 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF117Q03924 483 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 SRSF5Q13243 272 aaKnown RBP13.33□□□□□ -0.28
RRP1B-201ENST00000340648 TMEM268Q5VZI3 342 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 SLC16A13Q7RTY0 426 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 OR51H1Q8NH63 302 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 MRGPRX1Q96LB2 322 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 GCM1Q9NP62 436 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 ZNF230Q9UIE0 474 aaPredicted RBP13.33□□□□□ -0.28
RRP1B-201ENST00000340648 HLA-DQB1P01920 261 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 GLAP06280 429 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 CDAP32320 146 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 DRD3P35462 400 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 MEOX2P50222 304 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 ELLP55199 621 aaPredicted RBP13.33□□□□□ -0.28
RRP1B-201ENST00000340648 FUT5Q11128 374 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 OR11G2Q8NGC1 345 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 RXFP4Q8TDU9 374 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 HPSE2Q8WWQ2 592 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 LIPHQ8WWY8 451 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 CDH20Q9HBT6 801 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 HTD2P86397 168 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 OR51A2Q8NGJ7 313 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 RTN4IP1Q8WWV3 396 aaPredicted RBP13.33□□□□□ -0.28
RRP1B-201ENST00000340648 MAGT1Q9H0U3 335 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 NEUROG3Q9Y4Z2 214 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 MBTPS2O43462 519 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 ALOX12BO75342 701 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 FABP1P07148 127 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 FOLR3P41439 243 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 TAS2R30P59541 319 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 INPP5JQ15735 1006 aaPredicted RBP13.33□□□□□ -0.28
RRP1B-201ENST00000340648 PLXDC2Q6UX71 529 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 XIRP1Q702N8 1843 aaKnown RBP13.33□□□□□ -0.28
RRP1B-201ENST00000340648 OR4D10Q8NGI6 311 aa13.33□□□□□ -0.28
RRP1B-201ENST00000340648 SCN4AP35499 1836 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 ADAP1O75689 374 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 EFNB2P52799 333 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 NPAS1Q99742 590 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 PRR13Q9NZ81 148 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 TRAPPC2LQ9UL33 140 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 A0A0B4J293 547 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 H0YIG0 161 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 ADAM10O14672 748 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 MPZL1O95297 269 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 GLRA1P23415 457 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 EIF1P41567 113 aaKnown RBP13.32□□□□□ -0.28
RRP1B-201ENST00000340648 RBP2P50120 134 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 DCDP81605 110 aaKnown RBP13.32□□□□□ -0.28
RRP1B-201ENST00000340648 FAM53BQ14153 422 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 GUK1Q16774 197 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 SP6Q3SY56 376 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 DCAF12L2Q5VW00 463 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 LCN15Q6UWW0 184 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 SKA3Q8IX90 412 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 WNK3Q9BYP7 1800 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 CYB5BO43169 146 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 MRPL33O75394 65 aaKnown RBP13.32□□□□□ -0.28
RRP1B-201ENST00000340648 TUSC2O75896 110 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 CAPZBP47756 277 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 DUSP3P51452 185 aaPredicted RBP13.32□□□□□ -0.28
RRP1B-201ENST00000340648 ARHGAP5-AS1Q96IT6 56 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 MED9Q9NWA0 146 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 A8MXE2 369 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 DFFBO76075 338 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 CTLA4P16410 223 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 RAB1AP62820 205 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 BAXQ07812 192 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 ETFDHQ16134 617 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 FBXO46Q6PJ61 603 aaPredicted RBP13.32□□□□□ -0.28
RRP1B-201ENST00000340648 CNTD2Q9H8S5 307 aa13.32□□□□□ -0.28
RRP1B-201ENST00000340648 NSG1A0A0A6YYJ2 146 aa13.31□□□□□ -0.28
RRP1B-201ENST00000340648 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 MED19A0JLT2 244 aaPredicted RBP13.31□□□□□ -0.28
RRP1B-201ENST00000340648 M0R135 149 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms