RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 DNM1P34Q6PK57 102 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 OR5D14Q8NGL3 314 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.98■□□□□ 0.95
TSKU-201ENST00000333090 MED29Q9NX70 200 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 NPIPA1Q9UND3 350 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 EDARQ9UNE0 448 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 RNASEK-C17orf49H0YIS7 233 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 NME2P22392 152 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 SNRPEP62304 92 aaKnown RBP20.98■□□□□ 0.95
TSKU-201ENST00000333090 EBPQ15125 230 aaKnown RBP20.98■□□□□ 0.95
TSKU-201ENST00000333090 ANKRD55Q3KP44 614 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 FOXRED2Q8IWF2 684 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 C9orf40Q8IXQ3 194 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 RNF133Q8WVZ7 376 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 SMIM8Q96KF7 97 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 WIF1Q9Y5W5 379 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 HS3ST3A1Q9Y663 406 aa20.98■□□□□ 0.95
TSKU-201ENST00000333090 CPAMD8Q8IZJ3 1885 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 A0A0A6YYD4 124 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 TMEM14DPA8MWL7 114 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 SOCS1O15524 211 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 SLC6A9P48067 706 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 COL13A1Q5TAT6 717 aaPredicted RBP20.97■□□□□ 0.95
TSKU-201ENST00000333090 RPL7L1Q6DKI1 246 aaKnown RBP20.97■□□□□ 0.95
TSKU-201ENST00000333090 DEGS2Q6QHC5 323 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 KLHL24Q6TFL4 600 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 TTLL10Q6ZVT0 673 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 GRINAQ7Z429 371 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 SKA3Q8IX90 412 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 RAB3CQ96E17 227 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 AQP10Q96PS8 301 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 PBOV1Q9GZY1 135 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 LPAR5Q9H1C0 372 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 DHCR7Q9UBM7 475 aaKnown RBP20.97■□□□□ 0.95
TSKU-201ENST00000333090 PCDHGA1Q9Y5H4 931 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 H0YIG0 161 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 SEMA4FO95754 770 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 CLDN6P56747 220 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 PLAC9Q5JTB6 97 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 GLIPR1L1Q6UWM5 242 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 SAT2Q96F10 170 aaPredicted RBP20.97■□□□□ 0.95
TSKU-201ENST00000333090 BANF2Q9H503 90 aa20.97■□□□□ 0.95
TSKU-201ENST00000333090 COLCA2A8K830 154 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 TSPAN2O60636 221 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 ACAA1P09110 424 aaPredicted RBP20.96■□□□□ 0.95
TSKU-201ENST00000333090 RCC1P18754 421 aaPredicted RBP20.96■□□□□ 0.95
TSKU-201ENST00000333090 CD80P33681 288 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 SUPT4H1P63272 117 aaKnown RBP20.96■□□□□ 0.95
TSKU-201ENST00000333090 FZD2Q14332 565 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 ETV3LQ6ZN32 361 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 PRSS58Q8IYP2 241 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 SLAMF6Q96DU3 332 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 SLC5A7Q9GZV3 580 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 CLEC1BQ9P126 229 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 TMEM131Q92545 1883 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 WDR87Q6ZQQ6 2873 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 HTR3BO95264 441 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 THEGLP0DJG4 465 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 BCKDHBP21953 392 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 POU3F1Q03052 451 aaPredicted RBP20.96■□□□□ 0.95
TSKU-201ENST00000333090 PCK2Q16822 640 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 ASB10Q8WXI3 467 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 TAF9BQ9HBM6 251 aa20.96■□□□□ 0.95
TSKU-201ENST00000333090 SPTY2D1-AS1A0A0U1RR47 76 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 A0A1W2PQD3 144 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 MS4A18H0YCH9 400 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 CSTBP04080 98 aaKnown RBP20.95■□□□□ 0.94
TSKU-201ENST00000333090 GSK3AP49840 483 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 GFERP55789 205 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 RAB5BP61020 215 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 MS4A18Q3C1V0 323 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 COMMD2Q86X83 199 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 ARRDC1Q8N5I2 433 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 TGM7Q96PF1 710 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 TCRBV21S2A2A0A5A6 115 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 A6NIZ1 184 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 ABCD3P28288 659 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 AKR1C3P42330 323 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 GABRA4P48169 554 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 RAP1BP61224 184 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 RAP1AP62834 184 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 HABP2Q14520 560 aaPredicted RBP20.95■□□□□ 0.94
TSKU-201ENST00000333090 OR10H5Q8NGA6 315 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 NANPQ8TBE9 248 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 OR51E1Q8TCB6 317 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 ARL5BQ96KC2 179 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 SEC61A2Q9H9S3 476 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 DZANK1Q9NVP4 752 aa20.95■□□□□ 0.94
TSKU-201ENST00000333090 MRPS28Q9Y2Q9 187 aaKnown RBP20.95■□□□□ 0.94
TSKU-201ENST00000333090 IGHV5-51A0A0C4DH38 117 aa20.94■□□□□ 0.94
TSKU-201ENST00000333090 A0A1W2PP11 408 aa20.94■□□□□ 0.94
TSKU-201ENST00000333090 ZNF354AO60765 605 aaPredicted RBP20.94■□□□□ 0.94
TSKU-201ENST00000333090 CHRM2P08172 466 aa20.94■□□□□ 0.94
TSKU-201ENST00000333090 HOXB5P09067 269 aa20.94■□□□□ 0.94
TSKU-201ENST00000333090 LYL1P12980 280 aa20.94■□□□□ 0.94
TSKU-201ENST00000333090 CBR1P16152 277 aa20.94■□□□□ 0.94
TSKU-201ENST00000333090 ZNF20P17024 532 aa20.94■□□□□ 0.94
TSKU-201ENST00000333090 CAPZBP47756 277 aa20.94■□□□□ 0.94
TSKU-201ENST00000333090 FAM76BQ5HYJ3 339 aa20.94■□□□□ 0.94
TSKU-201ENST00000333090 VAX1Q5SQQ9 334 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms