RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CLDN23Q96B33 292 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 AMBRA1Q9C0C7 1298 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ZFP64Q9NPA5 681 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ANKRD10Q9NXR5 420 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 PTTG3PQ9NZH4 202 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 AMMECR1Q9Y4X0 333 aaPredicted RBP7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 TRGV10A0A0A0MS01 117 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ADAM10O14672 748 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 NDUFB3O43676 98 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 GABRA5P31644 462 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 DUSP5Q16690 384 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 Q499Y3 187 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 MOB1BQ7L9L4 216 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ADGRE4PQ86SQ3 457 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM200AQ86VY9 491 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 TUSC5Q8IXB3 177 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 OR5AS1Q8N127 324 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 OR6K3Q8NGY3 331 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 TAAR6Q96RI8 345 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 NRIP3Q9NQ35 241 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ONECUT1Q9UBC0 465 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 SYT14P1Q58G82 188 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 Q8IYB0 196 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 NPEPL1Q8NDH3 523 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 UTP4Q969X6 686 aaKnown RBP7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ITPKCQ96DU7 683 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 RAB18Q9NP72 206 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ATP6V1G2-DDX39BF2Z307 99 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF195O14628 629 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 SP9P0CG40 484 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 GCSHP23434 173 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 RFC3P40938 356 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ZXDBP98169 803 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 Q6ZSR9 355 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 OR51A4Q8NGJ6 313 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 NUDT16L1Q9BRJ7 211 aaKnown RBP7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 RAB1BQ9H0U4 201 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 UFSP2Q9NUQ7 469 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ACACBO00763 2458 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM72A0PK05 275 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ZFP92A6NM28 416 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 UQCRFS1P47985 274 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ACOT6Q3I5F7 207 aaPredicted RBP7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 SFXN4Q6P4A7 337 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 KDM8Q8N371 416 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 SLC16A11Q8NCK7 471 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 OR13C2Q8NGS9 318 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 ANKRD60Q9BZ19 345 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 MYOZ1Q9NP98 299 aaPredicted RBP7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 TERTO14746 1132 aaKnown RBP7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 CA5AP35218 305 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 RFX2P48378 723 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 BAMBIQ13145 260 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 SYPL1Q16563 259 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 MFSD4AQ8N468 514 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 BHLHE23Q8NDY6 225 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 EXOSC3Q9NQT5 275 aaKnown RBP7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 THYN1Q9P016 225 aa7.54□□□□□ -1.2
PCDHB1-201ENST00000306549 MEIKINA0A087WXM9 373 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 IGLV3-19P01714 112 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 CAPNS1P04632 268 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 GIFP27352 417 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 OPCMLQ14982 345 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 SPRED3Q2MJR0 410 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 SFTPA2Q8IWL1 248 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 SFTPA1Q8IWL2 248 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM217Q8N7C4 229 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 LKAAEAR1Q8TD35 194 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 TXNIPQ9H3M7 391 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 DUSP1P28562 367 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 SDHAP31040 664 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 SNRPGP62308 76 aaKnown RBP7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF85Q03923 595 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 SMAGPQ0VAQ4 97 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ADIRFQ15847 76 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 VMA21Q3ZAQ7 101 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 OR6M1Q8NGM8 313 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 APH1BQ8WW43 257 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 PATE1Q8WXA2 126 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ADIPOR1Q96A54 375 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 VN1R1Q9GZP7 353 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 PLCE1Q9P212 2302 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF716A6NP11 495 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ALDOCP09972 364 aaKnown RBP7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 PPP3CBP16298 524 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ARIH2OSQ8N7S6 290 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 FAM71CQ8NEG0 241 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 OR5D18Q8NGL1 313 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF696Q9H7X3 374 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 LOC100289279A0A1B0GTE1 492 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 PPM1DO15297 605 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 PGFP49763 221 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 CDK5R2Q13319 367 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 DESI1Q6ICB0 168 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 CYHR1Q6ZMK1 362 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 GPR78Q96P69 363 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 FYTTD1Q96QD9 318 aaKnown RBP7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 SLCO1B1Q9Y6L6 691 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 GPR37O15354 613 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 RPL35P42766 123 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms