RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PLSCR5A0PG75 271 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 OVOL3O00110 214 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 PRSS12P56730 875 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 CATSPERDQ86XM0 798 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 PPP1R14AQ96A00 147 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 VRK1Q99986 396 aaPredicted RBP20.94■□□□□ 0.94
HOXC9-201ENST00000303450 DUSP21Q9H596 190 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 ZNF391Q9UJN7 358 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 LRRC42Q9Y546 428 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 A0A0U1RQV5 110 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 GGT3PA6NGU5 568 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 HTR1AP08908 422 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 PPOXP50336 477 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 GBX2P52951 348 aaPredicted RBP20.93■□□□□ 0.94
HOXC9-201ENST00000303450 OR2G6Q5TZ20 316 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 COMMD2Q86X83 199 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 ELMOD2Q8IZ81 293 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 OR5AS1Q8N127 324 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 SPRYD4Q8WW59 207 aaPredicted RBP20.93■□□□□ 0.94
HOXC9-201ENST00000303450 SGCDQ92629 289 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 MS4A5Q9H3V2 200 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 ERVK-18Q9QC07 812 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 CGGBP1Q9UFW8 167 aaPredicted RBP20.93■□□□□ 0.94
HOXC9-201ENST00000303450 SLC22A13Q9Y226 551 aa20.93■□□□□ 0.94
HOXC9-201ENST00000303450 MYL12BO14950 172 aa20.92■□□□□ 0.94
HOXC9-201ENST00000303450 EEF1B2P24534 225 aaKnown RBP20.92■□□□□ 0.94
HOXC9-201ENST00000303450 LIPAP38571 399 aa20.92■□□□□ 0.94
HOXC9-201ENST00000303450 MRPL28Q13084 256 aaKnown RBP20.92■□□□□ 0.94
HOXC9-201ENST00000303450 BHLHE23Q8NDY6 225 aa20.92■□□□□ 0.94
HOXC9-201ENST00000303450 HAVCR2Q8TDQ0 301 aa20.92■□□□□ 0.94
HOXC9-201ENST00000303450 CYSLTR2Q9NS75 346 aa20.92■□□□□ 0.94
HOXC9-201ENST00000303450 ERGIC3Q9Y282 383 aa20.92■□□□□ 0.94
HOXC9-201ENST00000303450 H7C417 338 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 RGS10O43665 173 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 TTRP02766 147 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 NAT2P11245 290 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 MMP15P51511 669 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 FAM3AP98173 230 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 FDX2Q6P4F2 183 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 PRSS35Q8N3Z0 413 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 OR2G2Q8NGZ5 317 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 OR52N1Q8NH53 320 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 OR51E1Q8TCB6 317 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 TRMT61AQ96FX7 289 aaKnown RBP20.91■□□□□ 0.94
HOXC9-201ENST00000303450 BEX4Q9NWD9 120 aaPredicted RBP20.91■□□□□ 0.94
HOXC9-201ENST00000303450 CSMD2Q7Z408 3487 aa20.91■□□□□ 0.94
HOXC9-201ENST00000303450 hCG_38984A0A1B0GV85 526 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 CD300LBA8K4G0 201 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 IQCF6A8MYZ5 107 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 ZNF81P51508 661 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 ODF4Q2M2E3 257 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 DEFB113Q30KQ7 82 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 ZMAT1Q5H9K5 638 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 WDR38Q5JTN6 314 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 RNLSQ5VYX0 342 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 ZCCHC24Q8N2G6 241 aaKnown RBP20.9■□□□□ 0.94
HOXC9-201ENST00000303450 OR8G5Q8NG78 346 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 GATAD2BQ8WXI9 593 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 RNF166Q96A37 237 aaPredicted RBP20.9■□□□□ 0.94
HOXC9-201ENST00000303450 MBD6Q96DN6 1003 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 LYZL4Q96KX0 146 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 CDCA4Q9BXL8 241 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 CCDC90BQ9GZT6 254 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 MSL2Q9HCI7 577 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 GPR84Q9NQS5 396 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 ARID1AO14497 2285 aa20.9■□□□□ 0.94
HOXC9-201ENST00000303450 ERCC1P07992 297 aaPredicted RBP20.89■□□□□ 0.94
HOXC9-201ENST00000303450 GSK3AP49840 483 aa20.89■□□□□ 0.94
HOXC9-201ENST00000303450 KLBQ86Z14 1044 aa20.89■□□□□ 0.94
HOXC9-201ENST00000303450 YTHDF1Q9BYJ9 559 aaKnown RBP20.89■□□□□ 0.94
HOXC9-201ENST00000303450 RAB1BQ9H0U4 201 aa20.89■□□□□ 0.94
HOXC9-201ENST00000303450 TPK1Q9H3S4 243 aa20.89■□□□□ 0.94
HOXC9-201ENST00000303450 ZNF701Q9NV72 531 aaPredicted RBP20.89■□□□□ 0.94
HOXC9-201ENST00000303450 BABAM2Q9NXR7 383 aa20.89■□□□□ 0.94
HOXC9-201ENST00000303450 FRRS1LQ9P0K9 344 aa20.89■□□□□ 0.94
HOXC9-201ENST00000303450 C17orf100A8MU93 164 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 E9PI62 339 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 P2RY10O00398 339 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 DDOSTP39656 456 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 CCR9P51686 369 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 NANOS3P60323 173 aaKnown RBP20.88■□□□□ 0.93
HOXC9-201ENST00000303450 ALKBH1Q13686 389 aaKnown RBP20.88■□□□□ 0.93
HOXC9-201ENST00000303450 NANOGP1Q8N7R0 232 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 OR56B2PQ8NGI1 322 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 GTF3AQ92664 365 aaKnown RBP20.88■□□□□ 0.93
HOXC9-201ENST00000303450 FAM71F1Q96KD3 344 aaPredicted RBP20.88■□□□□ 0.93
HOXC9-201ENST00000303450 IGLV3-1P01715 115 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 KIR3DL2P43630 455 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 TGM4P49221 684 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 WNT4P56705 351 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 GABARAPL2P60520 117 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 PRSS48Q7RTY5 328 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 PERPQ96FX8 193 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 SOX7Q9BT81 388 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 MND1Q9BWT6 205 aa20.88■□□□□ 0.93
HOXC9-201ENST00000303450 PDZD2O15018 2839 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 ZSCAN5BA6NJL1 495 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 SPRY3O43610 288 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 LILRA1O75019 489 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 MTRF1O75570 445 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms