RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 F12P00748 615 aaPredicted RBP12.57□□□□□ -0.4
SDC2-201ENST00000302190 PDGFBP01127 241 aaPredicted RBP12.57□□□□□ -0.4
SDC2-201ENST00000302190 CSNK1A1P48729 337 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 VAMP2P63027 116 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 GABREP78334 506 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 MOGAT2Q3SYC2 334 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 TMEM71Q6P5X7 295 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 SULF2Q8IWU5 870 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 OR1M1Q8NGA1 313 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 OR5L2Q8NGL0 311 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 VN1R1Q9GZP7 353 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 LAT2Q9GZY6 243 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 RGCCQ9H4X1 137 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 CNTD2Q9H8S5 307 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 PTRH2Q9Y3E5 179 aaKnown RBP12.57□□□□□ -0.4
SDC2-201ENST00000302190 TRBV23-1A0A0A0MS06 115 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 C9J4A7 227 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 OR2J2O76002 312 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 TSPAN15O95858 294 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 QDPRP09417 244 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 OR8U9P0C7N5 309 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 CAMLGP49069 296 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 EIF5AP63241 154 aaKnown RBP12.57□□□□□ -0.4
SDC2-201ENST00000302190 INPP5JQ15735 1006 aaPredicted RBP12.57□□□□□ -0.4
SDC2-201ENST00000302190 RSPO4Q2I0M5 234 aaPredicted RBP12.57□□□□□ -0.4
SDC2-201ENST00000302190 CPEB2Q7Z5Q1 589 aaKnown RBP12.57□□□□□ -0.4
SDC2-201ENST00000302190 PCOLCE2Q9UKZ9 415 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 TP53I11O14683 189 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 OR7C1O76099 320 aaPredicted RBP12.57□□□□□ -0.4
SDC2-201ENST00000302190 RD3LP0DJH9 198 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 MGAT2Q10469 447 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 TAF9Q16594 264 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 NKAIN1Q4KMZ8 207 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 FNDC9Q8TBE3 224 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 RAB22AQ9UL26 194 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 FAM96BQ9Y3D0 163 aa12.57□□□□□ -0.4
SDC2-201ENST00000302190 A0A1W2PP11 408 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 SHISA7A6NL88 538 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 ZNHIT1O43257 154 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 HSPA12AO43301 675 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 GABRA1P14867 456 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 ADH6P28332 368 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 CD80P33681 288 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 KIR3DL2P43630 455 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 RAB5BP61020 215 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 RPS11P62280 158 aaKnown RBP eCLIP12.56□□□□□ -0.4
SDC2-201ENST00000302190 IL10RAQ13651 578 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 SP6Q3SY56 376 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 FHL5Q5TD97 284 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 OVCH2Q7RTZ1 564 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 C20orf196Q8IYI0 205 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 OR1L3Q8NH93 324 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 OR14L1PQ8NHC6 308 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 PTPMT1Q8WUK0 201 aaPredicted RBP12.56□□□□□ -0.4
SDC2-201ENST00000302190 SLC5A7Q9GZV3 580 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 DCAF16Q9NXF7 216 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 A0A1B0GX78 115 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 SGPP2Q8IWX5 399 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 PRSS35Q8N3Z0 413 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 BVESQ8NE79 360 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 OR4D6Q8NGJ1 314 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 ULBP2Q9BZM5 246 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 PBOV1Q9GZY1 135 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 FSCN3Q9NQT6 498 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 PCDHB10Q9UN67 800 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 MRPS18BQ9Y676 258 aaKnown RBP12.56□□□□□ -0.4
SDC2-201ENST00000302190 TNFSF14O43557 240 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 SCGNO76038 276 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 EPHA1P21709 976 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 LAP3P28838 519 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 GLP1RP43220 463 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 SLC37A1P57057 533 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 SKP2Q13309 424 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 ZNF565Q8N9K5 539 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 PIGCQ92535 297 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 TMPRSS13Q9BYE2 586 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 EVA1AQ9H8M9 152 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 R4GMQ9 66 aa12.56□□□□□ -0.4
SDC2-201ENST00000302190 GPR31O00270 319 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 UPK3AO75631 287 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 DIRAS3O95661 229 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 MT-ATP6P00846 226 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 POU2F2P09086 479 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 RPA2P15927 270 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 FAHP16930 419 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 ASCL1P50553 236 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 DCAF7P61962 342 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 GABRG3Q99928 467 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 MESP1Q9BRJ9 268 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 ESRP2Q9H6T0 727 aaKnown RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 NXT1Q9UKK6 140 aaKnown RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 CACNA1HO95180 2353 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 IGKV1D-42A0A075B6H8 117 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 NMBP08949 121 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 PSMB6P28072 239 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 RAG2P55895 527 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 SMAD4Q13485 552 aaKnown RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 CLINT1Q14677 625 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 ATPAF1Q5TC12 328 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms