RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 STARD10Q9Y365 291 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 CFAP54Q96N23 3096 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 P2RY10O00398 339 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 LDLRAD4O15165 306 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 ZNF205O95201 554 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 PRH1P02810 166 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 TRGC2P03986 189 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 ZNF708P17019 499 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 RPL12P30050 165 aaKnown RBP12.01□□□□□ -0.49
SKA3-201ENST00000298260 GNALP38405 381 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 EGR4Q05215 589 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 ENPP2Q13822 863 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 ZNF74Q16587 644 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 RD3Q7Z3Z2 195 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 HOGA1Q86XE5 327 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 LINC00346Q8IVM7 164 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 LRRC75AQ8NAA5 344 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 Q8WTZ3 238 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 OR8B4Q96RC9 309 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 SLCO5A1Q9H2Y9 848 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 SLC17A5Q9NRA2 495 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 PHOX2AO14813 284 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 TCAPO15273 167 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 F10P00742 488 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 SERPINA2P20848 420 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 PMELP40967 661 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 ERVFRD-1P60508 538 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 PRPS1P60891 318 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 BEND4Q6ZU67 534 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 KDM8Q8N371 416 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 HSD17B11Q8NBQ5 300 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 OR1J1Q8NGS3 322 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 LCN9Q8WX39 176 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 RBM18Q96H35 190 aaKnown RBP12.01□□□□□ -0.49
SKA3-201ENST00000298260 BANF2Q9H503 90 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 KCNJ16Q9NPI9 418 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 GDE1Q9NZC3 331 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 SERGEFQ9UGK8 458 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 CA14Q9ULX7 337 aa12.01□□□□□ -0.49
SKA3-201ENST00000298260 MASP2O00187 686 aa12□□□□□ -0.49
SKA3-201ENST00000298260 SLC16A7O60669 478 aa12□□□□□ -0.49
SKA3-201ENST00000298260 CRABP1P29762 137 aa12□□□□□ -0.49
SKA3-201ENST00000298260 CAMLGP49069 296 aa12□□□□□ -0.49
SKA3-201ENST00000298260 CYCSP99999 105 aaKnown RBP12□□□□□ -0.49
SKA3-201ENST00000298260 CD226Q15762 336 aa12□□□□□ -0.49
SKA3-201ENST00000298260 NPSR1Q6W5P4 371 aa12□□□□□ -0.49
SKA3-201ENST00000298260 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
SKA3-201ENST00000298260 C19orf47Q8N9M1 422 aaKnown RBP12□□□□□ -0.49
SKA3-201ENST00000298260 TERB2Q8NHR7 220 aa12□□□□□ -0.49
SKA3-201ENST00000298260 ASB16Q96NS5 453 aa12□□□□□ -0.49
SKA3-201ENST00000298260 STACQ99469 402 aa12□□□□□ -0.49
SKA3-201ENST00000298260 MRPL22Q9NWU5 206 aaKnown RBP12□□□□□ -0.49
SKA3-201ENST00000298260 LRP12Q9Y561 859 aa12□□□□□ -0.49
SKA3-201ENST00000298260 PCNX3Q9H6A9 2034 aa12□□□□□ -0.49
SKA3-201ENST00000298260 LOC107986453A0A1B0GWG9 222 aa12□□□□□ -0.49
SKA3-201ENST00000298260 K7EPK0 472 aa12□□□□□ -0.49
SKA3-201ENST00000298260 XRCC2O43543 280 aa12□□□□□ -0.49
SKA3-201ENST00000298260 HCRTR1O43613 425 aa12□□□□□ -0.49
SKA3-201ENST00000298260 VSIG8P0DPA2 414 aa12□□□□□ -0.49
SKA3-201ENST00000298260 RNH1P13489 461 aaKnown RBP12□□□□□ -0.49
SKA3-201ENST00000298260 THBS4P35443 961 aa12□□□□□ -0.49
SKA3-201ENST00000298260 SLC25A1P53007 311 aa12□□□□□ -0.49
SKA3-201ENST00000298260 CCL20P78556 96 aa12□□□□□ -0.49
SKA3-201ENST00000298260 NFATC4Q14934 902 aa12□□□□□ -0.49
SKA3-201ENST00000298260 DHCR24Q15392 516 aa12□□□□□ -0.49
SKA3-201ENST00000298260 TOMM34Q15785 309 aaPredicted RBP12□□□□□ -0.49
SKA3-201ENST00000298260 HAGHQ16775 308 aa12□□□□□ -0.49
SKA3-201ENST00000298260 ZNF385CQ66K41 422 aaPredicted RBP12□□□□□ -0.49
SKA3-201ENST00000298260 AWAT2Q6E213 333 aa12□□□□□ -0.49
SKA3-201ENST00000298260 ZNF765Q7L2R6 523 aa12□□□□□ -0.49
SKA3-201ENST00000298260 FAM71E2Q8N5Q1 922 aa12□□□□□ -0.49
SKA3-201ENST00000298260 POC1AQ8NBT0 407 aa12□□□□□ -0.49
SKA3-201ENST00000298260 FGGYQ96C11 551 aa12□□□□□ -0.49
SKA3-201ENST00000298260 ZNF558Q96NG5 402 aa12□□□□□ -0.49
SKA3-201ENST00000298260 RTBDNQ9BSG5 229 aaPredicted RBP12□□□□□ -0.49
SKA3-201ENST00000298260 TCEAL2Q9H3H9 227 aaPredicted RBP12□□□□□ -0.49
SKA3-201ENST00000298260 TUBA4BQ9H853 241 aa12□□□□□ -0.49
SKA3-201ENST00000298260 MMP25Q9NPA2 562 aa12□□□□□ -0.49
SKA3-201ENST00000298260 PPP4R1LQ9P1A2 415 aa12□□□□□ -0.49
SKA3-201ENST00000298260 COL4A6Q14031 1691 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 H0YL77 283 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 SOCS1O15524 211 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 HOXA2O43364 376 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 ZNF217O75362 1048 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 OR6A2O95222 327 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 SFT2D2O95562 160 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 GPR75O95800 540 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 CST4P01036 141 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 CD37P11049 281 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 EGR3Q06889 387 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 OR8G1Q15617 311 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 IAH1Q2TAA2 248 aaPredicted RBP11.99□□□□□ -0.49
SKA3-201ENST00000298260 SLC39A11Q8N1S5 342 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 C17orf78Q8N4C9 275 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 OR14K1Q8NGZ2 314 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 CCL4L1Q8NHW4 92 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 ABHD14AQ9BUJ0 271 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 ST6GALNAC5Q9BVH7 336 aa11.99□□□□□ -0.49
SKA3-201ENST00000298260 FOXQ1Q9C009 403 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms