RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 F8P00451 2351 aa21.39■■□□□ 1.01
SSBP4-201ENST00000270061 TEP1Q99973 2627 aaKnown RBP21.39■■□□□ 1.01
SSBP4-201ENST00000270061 UPK1BO75841 260 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 IFITM3Q01628 133 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 CCDC92Q53HC0 331 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-201ENST00000270061 METAP1DQ6UB28 335 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-201ENST00000270061 LRRTM1Q86UE6 522 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 LRRC18Q8N456 261 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 ORAI1Q96D31 301 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 FBXO17Q96EF6 278 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 DIRAS2Q96HU8 199 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 GFI1Q99684 422 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 KCNJ15Q99712 375 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 CCDC32Q9BV29 185 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 ROS1P08922 2347 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 HPGDSO60760 199 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 TTRP02766 147 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 ZNF12P17014 697 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 PSMD7P51665 324 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 ZNF181Q2M3W8 571 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 ELFN2Q5R3F8 820 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 TFAP2EQ6VUC0 442 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 SOSTQ9BQB4 213 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 LIME1Q9H400 295 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 EDARQ9UNE0 448 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 V9GY05 133 aa21.38■■□□□ 1.01
SSBP4-201ENST00000270061 LOC107986453A0A1B0GWG9 222 aa21.37■■□□□ 1.01
SSBP4-201ENST00000270061 ATF1P18846 271 aa21.37■■□□□ 1.01
SSBP4-201ENST00000270061 EVX1P49640 407 aa21.37■■□□□ 1.01
SSBP4-201ENST00000270061 SLC22A24Q8N4F4 322 aa21.37■■□□□ 1.01
SSBP4-201ENST00000270061 ZC3HAV1LQ96H79 300 aaKnown RBP21.37■■□□□ 1.01
SSBP4-201ENST00000270061 SLC7A10Q9NS82 523 aa21.37■■□□□ 1.01
SSBP4-201ENST00000270061 FOXJ3Q9UPW0 622 aa21.37■■□□□ 1.01
SSBP4-201ENST00000270061 KRT33AO76009 404 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 CD2P06729 351 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 PTBP1P26599 531 aaKnown RBP eCLIP21.36■■□□□ 1.01
SSBP4-201ENST00000270061 ZNF627Q7L945 461 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 NINJ1Q92982 152 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 SDHCQ99643 169 aaPredicted RBP21.36■■□□□ 1.01
SSBP4-201ENST00000270061 FABP12A6NFH5 140 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 IFITM5A6NNB3 132 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 AIPO00170 330 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 ACSM4P0C7M7 580 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 SLC2A2P11168 524 aaPredicted RBP21.36■■□□□ 1.01
SSBP4-201ENST00000270061 PPP3CBP16298 524 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 CRYGSP22914 178 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 OTX1P32242 354 aaPredicted RBP21.36■■□□□ 1.01
SSBP4-201ENST00000270061 CX3CR1P49238 355 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 SCRN3Q0VDG4 424 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 APH1AQ96BI3 265 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 MRI1Q9BV20 369 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 HIVEP1P15822 2718 aa21.36■■□□□ 1.01
SSBP4-201ENST00000270061 ITPR3Q14573 2671 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 TRAV8-7A0A075B6U6 113 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 ISPDA4D126 451 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 APOC1P02654 83 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 ADRA2CP18825 462 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 FSTP19883 344 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 PRKXP51817 358 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 ZNF121P58317 390 aaPredicted RBP21.35■■□□□ 1.01
SSBP4-201ENST00000270061 PCBD1P61457 104 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 ZNF79Q15937 498 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 C22orf34Q6ZV56 151 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 PRSS45Q7RTY3 260 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 LRRC28Q86X40 367 aaPredicted RBP21.35■■□□□ 1.01
SSBP4-201ENST00000270061 CMTM3Q96MX0 182 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 SH3GL3Q99963 347 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 HDHD2Q9H0R4 259 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 OCEL1Q9H607 264 aa21.35■■□□□ 1.01
SSBP4-201ENST00000270061 P2RY10O00398 339 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 B4GALT1P15291 398 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 PSMB1P20618 241 aaKnown RBP21.34■■□□□ 1.01
SSBP4-201ENST00000270061 CFPP27918 469 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 ECH1Q13011 328 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 RAB35Q15286 201 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 RGS21Q2M5E4 152 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 CNIH2Q6PI25 160 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 FAM131AQ6UXB0 335 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.34■■□□□ 1.01
SSBP4-201ENST00000270061 GABRG1Q8N1C3 465 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 ZNF283Q8N7M2 679 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 TRMT10AQ8TBZ6 339 aaKnown RBP21.34■■□□□ 1.01
SSBP4-201ENST00000270061 ACTR6Q9GZN1 396 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 SRRQ9GZT4 340 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 PLEKHF2Q9H8W4 249 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 BRD7Q9NPI1 651 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 PLEK2Q9NYT0 353 aa21.34■■□□□ 1.01
SSBP4-201ENST00000270061 ZNF587BE7ETH6 402 aa21.33■■□□□ 1.01
SSBP4-201ENST00000270061 TBX1O43435 398 aa21.33■■□□□ 1.01
SSBP4-201ENST00000270061 IGFBP3P17936 291 aaPredicted RBP21.33■■□□□ 1.01
SSBP4-201ENST00000270061 RSPO1Q2MKA7 263 aaPredicted RBP21.33■■□□□ 1.01
SSBP4-201ENST00000270061 CXorf67Q86X51 503 aaPredicted RBP21.33■■□□□ 1.01
SSBP4-201ENST00000270061 ZNF433Q8N7K0 673 aaPredicted RBP21.33■■□□□ 1.01
SSBP4-201ENST00000270061 OR13C3Q8NGS6 347 aa21.33■■□□□ 1.01
SSBP4-201ENST00000270061 CYSLTR2Q9NS75 346 aa21.33■■□□□ 1.01
SSBP4-201ENST00000270061 SPATA2Q9UM82 520 aa21.33■■□□□ 1.01
SSBP4-201ENST00000270061 PLEKHA6Q9Y2H5 1048 aa21.33■■□□□ 1.01
SSBP4-201ENST00000270061 TIMM10BQ9Y5J6 103 aa21.33■■□□□ 1.01
SSBP4-201ENST00000270061 MED13LQ71F56 2210 aa21.33■■□□□ 1.01
SSBP4-201ENST00000270061 DEFB108AA8MXU0 73 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms