RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 FZD6O60353 706 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 PMS2P2O95744 297 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 FBXO45P0C2W1 286 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 RAB5AP20339 215 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 FCARP24071 287 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 SELENOWP63302 87 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 EDDM3AQ14507 147 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 P2RY14Q15391 338 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 PCK2Q16822 640 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 LPCAT3Q6P1A2 487 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 UQCC3Q6UW78 93 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 ZNF573Q86YE8 665 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 RELL2Q8NC24 303 aaPredicted RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 DMBX1Q8NFW5 382 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 OR6T1Q8NGN1 323 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 OR1J1Q8NGS3 322 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 OR13C9Q8NGT0 318 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 OR4K13Q8NH42 304 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 GPR148Q8TDV2 347 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 LIPHQ8WWY8 451 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 DNASE2BQ8WZ79 361 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 DYRK2Q92630 601 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 EMG1Q92979 244 aaKnown RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 ZNF300Q96RE9 604 aaPredicted RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 NICN1Q9BSH3 213 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 INPP5KQ9BT40 448 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 TAF9BQ9HBM6 251 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 HMGN2P05204 90 aaKnown RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 CST2P09228 141 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 CCL4P13236 92 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 NID1P14543 1247 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 TNFRSF1BP20333 461 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 SH3BP2P78314 561 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 MICBQ29980 383 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 ABHD17CQ6PCB6 329 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 PLXDC2Q6UX71 529 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 SLC35F2Q8IXU6 374 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 MEGF10Q96KG7 1140 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 CSF3RQ99062 836 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 TMEM59Q9BXS4 323 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 MS4A8Q9BY19 250 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 OR2A25A4D2G3 310 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 CDHR4A6H8M9 788 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 TERTO14746 1132 aaKnown RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 NKX2-8O15522 239 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 AQP8O94778 261 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 FOLR1P15328 257 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 GPX3P22352 226 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 USF1P22415 310 aaPredicted RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 DRD3P35462 400 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 CCR9P51686 369 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 RPS18P62269 152 aaKnown RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 LTBQ06643 244 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 ANKRD34AQ69YU3 496 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 CA13Q8N1Q1 262 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 RBMXL3Q8N7X1 1067 aaKnown RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 SCMH1Q96GD3 660 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 POM121Q96HA1 1249 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 UHRF2Q96PU4 802 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 ST6GALNAC5Q9BVH7 336 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 SLC23A1Q9UHI7 598 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 RNF115Q9Y4L5 304 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 A0A0A6YYJ9 748 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 DNASE2O00115 360 aaPredicted RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 FAM87AP0C7U9 286 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 HLA-DOBP13765 273 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 EDN3P14138 238 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 F2RP25116 425 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 RPS25P62851 125 aaKnown RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 ZNF91Q05481 1191 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 ZNF266Q14584 549 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 CCNJQ5T5M9 372 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 ZNF683Q8IZ20 524 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 COMMD1Q8N668 190 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 LILRA3Q8N6C8 439 aaPredicted RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 ARL6IP6Q8N6S5 226 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 C15orf54Q8N8G6 183 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 OR13D1Q8NGV5 346 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 OR4A16Q8NH70 328 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 LKAAEAR1Q8TD35 194 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 PTPMT1Q8WUK0 201 aaPredicted RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 L3HYPDHQ96EM0 354 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 LINC00615Q96LM1 132 aaPredicted RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 FAM103A1Q9BTL3 118 aaKnown RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 TAAR3PQ9P1P4 343 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 KCNG2Q9UJ96 466 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 GDF2Q9UK05 429 aaPredicted RBP7.06□□□□□ -1.28
USP3-201ENST00000268049 MICAL3Q7RTP6 2002 aa7.06□□□□□ -1.28
USP3-201ENST00000268049 CD300LBA8K4G0 201 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 SNRPBP14678 240 aaKnown RBP7.05□□□□□ -1.28
USP3-201ENST00000268049 CD1EP15812 388 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 RAB11AP62491 216 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 HABP2Q14520 560 aaPredicted RBP7.05□□□□□ -1.28
USP3-201ENST00000268049 CEBPEQ15744 281 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 CDONQ4KMG0 1287 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 SFXN4Q6P4A7 337 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 PET117Q6UWS5 81 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 TRILQ7L0X0 811 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 CRIPAKQ8N1N5 446 aa7.05□□□□□ -1.28
USP3-201ENST00000268049 C3orf56Q8N813 242 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms