RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 F13BP05160 661 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 OR13C7P0DN81 318 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 RABIFP47224 123 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 EMDP50402 254 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 S100A10P60903 97 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 EGR3Q06889 387 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 ZNF616Q08AN1 781 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 GXYLT1Q4G148 440 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 PHF19Q5T6S3 580 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 FCRL6Q6DN72 434 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 KIRREL2Q6UWL6 708 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 MARCH1Q8TCQ1 289 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 LIPHQ8WWY8 451 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 RERGQ96A58 199 aaPredicted RBP11.72□□□□□ -0.53
NUP54-201ENST00000264883 OR2M4Q96R27 311 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 ATG101Q9BSB4 218 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 G6PC3Q9BUM1 346 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 LAMP5Q9UJQ1 280 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 PUS1Q9Y606 427 aaKnown RBP eCLIP11.72□□□□□ -0.53
NUP54-201ENST00000264883 TMEM14AQ9Y6G1 99 aa11.72□□□□□ -0.53
NUP54-201ENST00000264883 A0A0A6YYH2 397 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 A6NJ64 397 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 RAB27BO00194 218 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 CYR61O00622 381 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 PHOX2AO14813 284 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 IFNA6P05013 189 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 SLC35E2P0CK97 266 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 IL2RGP31785 369 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 HRH1P35367 487 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 ADPRHP54922 357 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 UCP2P55851 309 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 EXOSC7Q15024 291 aaKnown RBP11.71□□□□□ -0.53
NUP54-201ENST00000264883 EMC4Q5J8M3 183 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 GLYATL3Q5SZD4 288 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 MDGA2Q7Z553 956 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 ADGRE4PQ86SQ3 457 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 CDC20BQ86Y33 519 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 GVQW1Q8N7I0 195 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 OIT3Q8WWZ8 545 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 MVB12AQ96EY5 273 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 NOL4LQ96MY1 436 aaPredicted RBP11.71□□□□□ -0.53
NUP54-201ENST00000264883 TSSK2Q96PF2 358 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 APOOQ9BUR5 198 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 CRLF2Q9HC73 371 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 CUTCQ9NTM9 273 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 PILRAQ9UKJ1 303 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 MTCH2Q9Y6C9 303 aa11.71□□□□□ -0.53
NUP54-201ENST00000264883 FAM221BA6H8Z2 402 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 ZNF354AO60765 605 aaPredicted RBP11.71□□□□□ -0.54
NUP54-201ENST00000264883 JTBO76095 146 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 CHATP28329 748 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 IGFALSP35858 605 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 GRK6P43250 576 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 KIR3DL2P43630 455 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 ID2Q02363 134 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 DMWDQ09019 674 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 SLC9A3R2Q15599 337 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 SLC22A6Q4U2R8 563 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 AKR1C8PQ5T2L2 129 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 YAF2Q8IY57 180 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 RCBTB1Q8NDN9 531 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 SEMA6DQ8NFY4 1073 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 FLVCR1-AS1Q8TAF5 88 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 PACRGQ96M98 296 aaPredicted RBP11.71□□□□□ -0.54
NUP54-201ENST00000264883 GNRHR2Q96P88 292 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 ZNF587Q96SQ5 575 aaPredicted RBP11.71□□□□□ -0.54
NUP54-201ENST00000264883 CMKLR1Q99788 373 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 ZFYVE21Q9BQ24 234 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 CNTNAP3Q9BZ76 1288 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 FAM212BQ9NTI7 297 aaPredicted RBP11.71□□□□□ -0.54
NUP54-201ENST00000264883 PRODH2Q9UF12 536 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 TRPM6Q9BX84 2022 aa11.71□□□□□ -0.54
NUP54-201ENST00000264883 SMCO3A2RU48 225 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 C4orf47A7E2U8 309 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 ZNF727A8MUV8 499 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 CYTIPO60759 359 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 KAT7O95251 611 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 TXNDC12O95881 172 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 CXCL1P09341 107 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 SPARCP09486 303 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 GDI1P31150 447 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 FAM3AP98173 230 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 TMEM128Q5BJH2 165 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 FIGLAQ6QHK4 219 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 ZAR1Q86SH2 424 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 EXD3Q8N9H8 876 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 BEND2Q8NDZ0 799 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 OR52R1Q8NGF1 315 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 OR10C1Q96KK4 312 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 WDR92Q96MX6 357 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 DCBLD2Q96PD2 775 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 NUDT9Q9BW91 350 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 METTL8Q9H825 291 aaKnown RBP11.7□□□□□ -0.54
NUP54-201ENST00000264883 PRR13Q9NZ81 148 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 HIF3AQ9Y2N7 669 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 FBXO7Q9Y3I1 522 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 EML5Q05BV3 1969 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 CD37P11049 281 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 PNMTP11086 282 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms