RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 GGACTQ9BVM4 153 aa11.03□□□□□ -0.64
CHMP2B-201ENST00000263780 EIF5A2Q9GZV4 153 aaKnown RBP11.03□□□□□ -0.64
CHMP2B-201ENST00000263780 CUTCQ9NTM9 273 aa11.03□□□□□ -0.64
CHMP2B-201ENST00000263780 OBP2AQ9NY56 170 aa11.03□□□□□ -0.64
CHMP2B-201ENST00000263780 COA3Q9Y2R0 106 aaPredicted RBP11.03□□□□□ -0.64
CHMP2B-201ENST00000263780 SPTBP11277 2137 aa11.02□□□□□ -0.64
CHMP2B-201ENST00000263780 K7EQS6 105 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 TNFRSF10CO14798 259 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 SYT7O43581 403 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 IFNA21P01568 189 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 SFTPBP07988 381 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 SEC11BP0C7V7 166 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 HIST1H1DP16402 221 aaKnown RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 AMY2BP19961 511 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 PGCP20142 388 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 S100A2P29034 98 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 GJA4P35212 333 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 RBMXP38159 391 aaKnown RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 SUCLG1P53597 346 aaKnown RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 SUPT4H1P63272 117 aaKnown RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 DEFA6Q01524 100 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 OTPQ5XKR4 325 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 DCXRQ7Z4W1 244 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 CCL4L1Q8NHW4 92 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 TSACCQ96A04 125 aaPredicted RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 SMDT1Q9H4I9 107 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 KCNJ16Q9NPI9 418 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 SUSD2Q9UGT4 822 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 C14orf166Q9Y224 244 aaKnown RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 B3GALT5Q9Y2C3 310 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 STRAPQ9Y3F4 350 aaKnown RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 LTBP2Q14767 1821 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 HEATR5AQ86XA9 2040 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 A0A0A6YYC8 382 aaPredicted RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 I3L1I5 382 aaPredicted RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF217O75362 1048 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF93P35789 620 aaPredicted RBP11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 SULT1A1P50225 295 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 HSD17B7P56937 341 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 RUNX3Q13761 415 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 PCK2Q16822 640 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 ARMC6Q6NXE6 501 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 COX15Q7KZN9 410 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 FAM24BQ8N5W8 94 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF565Q8N9K5 539 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 BHLHE23Q8NDY6 225 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 FAM131CQ96AQ9 280 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 FBXO17Q96EF6 278 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 FBXL17Q9UF56 701 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 SRPK3Q9UPE1 567 aa11.02□□□□□ -0.65
CHMP2B-201ENST00000263780 hCG_1809904A0A1W2PP81 198 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 A0A1W2PR64 198 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 A0A1W2PRV1 198 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 POM121BA6NF01 834 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 UMAD1C9J7I0 102 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 HCRTR2O43614 444 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 IFNA2P01563 188 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 HOXB5P09067 269 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 ST6GAL1P15907 406 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF708P17019 499 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 HOXA5P20719 270 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 MIDNQ504T8 468 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 LHFPL1Q86WI0 220 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 LFNGQ8NES3 379 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 ISOC2Q96AB3 205 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF775Q96BV0 537 aaPredicted RBP11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 MESP1Q9BRJ9 268 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 URM1Q9BTM9 101 aaKnown RBP11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 RSRP1Q9BUV0 290 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 LPAR5Q9H1C0 372 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 SLC35B3Q9H1N7 401 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 PPIHO43447 177 aaKnown RBP11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 SLC34A2O95436 690 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 DANCRP0C864 163 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF20P17024 532 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 P2RY4P51582 365 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 POLR2HP52434 150 aaKnown RBP11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF117Q03924 483 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 IAH1Q2TAA2 248 aaPredicted RBP11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 DBX2Q6ZNG2 339 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 SLC26A10Q8NG04 563 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 FNDC9Q8TBE3 224 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 ST7LQ8TDW4 575 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 MRPL38Q96DV4 380 aaKnown RBP11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 SLC46A1Q96NT5 459 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 IP6K3Q96PC2 410 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 DEFB118Q96PH6 123 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 PRRX2Q99811 253 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 ARV1Q9H2C2 271 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 UFSP2Q9NUQ7 469 aa11.01□□□□□ -0.65
CHMP2B-201ENST00000263780 TRBV23-1A0A0A0MS06 115 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 A8MVM7 634 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 PLPP3O14495 311 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 LMX1BO60663 402 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 DEDDO75618 318 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 CTNNB1P35222 781 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 CDX1P47902 265 aaPredicted RBP11□□□□□ -0.65
CHMP2B-201ENST00000263780 TMEM33P57088 247 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 SLC26A5P58743 744 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 OR2B8PP59922 312 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms