RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PALMDQ9NP74 551 aa19.86■□□□□ 0.77
SMARCB1-201ENST00000263121 TLN1Q9Y490 2541 aaKnown RBP19.86■□□□□ 0.77
SMARCB1-201ENST00000263121 A0A0G2JNJ9 132 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 DHRS7CA6NNS2 312 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 CCL2P13500 99 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 ZNF14P17017 642 aaPredicted RBP19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 APLNRP35414 380 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 PGAP1Q75T13 922 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 NKAIN3Q8N8D7 197 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 SPSB4Q96A44 273 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 C10orf35Q96D05 121 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 DIRAS2Q96HU8 199 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 MRI1Q9BV20 369 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 PLEKHA1Q9HB21 404 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 Q9UFV3 132 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 ADAM30Q9UKF2 790 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 SPATA2Q9UM82 520 aa19.85■□□□□ 0.77
SMARCB1-201ENST00000263121 XRCC2O43543 280 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 OPRM1P35372 400 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 THBS4P35443 961 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 EVX1P49640 407 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 SPOCK1Q08629 439 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 LY6DQ14210 128 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 GLT8D1Q68CQ7 371 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 FAM166AQ6J272 317 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 LYPD6Q86Y78 171 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 SAMD12Q8N8I0 201 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 LGALS14Q8TCE9 139 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 LIN7BQ9HAP6 207 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 RTTNQ86VV8 2226 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 A0A1W2PR80 420 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 ERVH48-1M5A8F1 160 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 SLC17A2O00624 439 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 MSTNO14793 375 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 CALCBP10092 127 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 ELK1P19419 428 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 RAB3AP20336 220 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 CCNOP22674 350 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 BDKRB2P30411 391 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 HOXC12P31275 282 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 CNIH2Q6PI25 160 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 PCSK4Q6UW60 755 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 BHLHA15Q7RTS1 189 aaPredicted RBP19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 LRRC28Q86X40 367 aaPredicted RBP19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 SLC30A7Q8NEW0 376 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 OR13C9Q8NGT0 318 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 ZNF671Q8TAW3 534 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 SOSTQ9BQB4 213 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 TMEM138Q9NPI0 162 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 STEAP1Q9UHE8 339 aa19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 DSPP15924 2871 aaKnown RBP19.84■□□□□ 0.77
SMARCB1-201ENST00000263121 ZGRF1Q86YA3 2104 aa19.83■□□□□ 0.77
SMARCB1-201ENST00000263121 hCG_38984A0A1B0GV85 526 aa19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 EIF4EP06730 217 aaKnown RBP19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 CLDN12P56749 244 aa19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 ZNF92Q03936 586 aa19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 ST6GALNAC3Q8NDV1 305 aa19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 AKAP1Q92667 903 aaKnown RBP eCLIP19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 APOBEC3DQ96AK3 386 aaPredicted RBP19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 PIGMQ9H3S5 423 aa19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 OBP2BQ9NPH6 170 aa19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 CYSLTR2Q9NS75 346 aa19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 ZNF629Q9UEG4 869 aaPredicted RBP19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 SH3BGRL2Q9UJC5 107 aa19.83■□□□□ 0.76
SMARCB1-201ENST00000263121 SULT1B1O43704 296 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 CBR1P16152 277 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 FAHP16930 419 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 ACKR3P25106 362 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 TNK1Q13470 666 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 ZNF79Q15937 498 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 C16orf87Q6PH81 154 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 MYPOPQ86VE0 399 aaPredicted RBP19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 OR5AS1Q8N127 324 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 PAQR4Q8N4S7 273 aaPredicted RBP19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 SEMA6DQ8NFY4 1073 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 PP6455Q8WZ26 134 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 CMTM3Q96MX0 182 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 OR5V1Q9UGF6 321 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 PIGLQ9Y2B2 252 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 RHBDD3Q9Y3P4 386 aa19.82■□□□□ 0.76
SMARCB1-201ENST00000263121 FABP12A6NFH5 140 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 APOA1P02647 267 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 CELA3BP08861 270 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 WNT5AP41221 380 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 SCAND1P57086 179 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 FAM3AP98173 230 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 C1orf100Q5SVJ3 147 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 METAP1DQ6UB28 335 aaPredicted RBP19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 UTS2BQ765I0 119 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 FOXRED1Q96CU9 486 aaPredicted RBP19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 SDHCQ99643 169 aaPredicted RBP19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 CHST5Q9GZS9 411 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 CGGBP1Q9UFW8 167 aaPredicted RBP19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 OR5H1A6NKK0 313 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 A8MXE2 369 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 FAM25AB3EWG3 89 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 FAM25CB3EWG5 89 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 FAM25GB3EWG6 89 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 IGKV3-15P01624 115 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 ERCC1P07992 297 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms