RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 RAB11BQ15907 218 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 TBRG1Q3YBR2 411 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 GLYATL3Q5SZD4 288 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 Q6ZNX1 250 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 PGAP1Q75T13 922 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 CD163Q86VB7 1156 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 CENPSQ8N2Z9 138 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 CCDC54Q8NEL0 328 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 OR51D1Q8NGF3 324 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 FAM57AQ8TBR7 257 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 C1QTNF5Q9BXJ0 243 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 ABCG5Q9H222 651 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
HDHD3-201ENST00000238379 TUBD1Q9UJT1 453 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 RHBDD3Q9Y3P4 386 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 CHD8Q9HCK8 2581 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 TLN1Q9Y490 2541 aaKnown RBP13.23□□□□□ -0.29
HDHD3-201ENST00000238379 SULT1B1O43704 296 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 MTRF1O75570 445 aaKnown RBP13.23□□□□□ -0.29
HDHD3-201ENST00000238379 CGAP01215 116 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 STOMP27105 288 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 PER3P56645 1201 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 TGFBR3Q03167 851 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 C1orf185Q5T7R7 199 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 TMEM53Q6P2H8 277 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 ZNF584Q8IVC4 421 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 OR5AS1Q8N127 324 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 RPRMLQ8N4K4 120 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 OR52N4Q8NGI2 321 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 OR6M1Q8NGM8 313 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 OR2AE1Q8NHA4 323 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 FAM3DQ96BQ1 224 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 FOXRED1Q96CU9 486 aaPredicted RBP13.23□□□□□ -0.29
HDHD3-201ENST00000238379 STARD4Q96DR4 205 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 PLEKHA1Q9HB21 404 aa13.23□□□□□ -0.29
HDHD3-201ENST00000238379 CRHP06850 196 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 COX5AP20674 150 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 HTR2CP28335 458 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 GSG1Q2KHT4 349 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 C2orf76Q3KRA6 126 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 GABRG1Q8N1C3 465 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 Q8N402 240 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 JAGN1Q8N5M9 183 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 SYNPRQ8TBG9 265 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 C10orf35Q96D05 121 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 REEP6Q96HR9 211 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 POM121L2Q96KW2 1035 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 ZNF75AQ96N20 296 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 ABHD1Q96SE0 405 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 SLX1AQ9BQ83 275 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 ZNF391Q9UJN7 358 aa13.22□□□□□ -0.29
HDHD3-201ENST00000238379 A0A1W2PQ09 198 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 C5orf49A4QMS7 147 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 LYZL6O75951 148 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 EDN3P14138 238 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 THBS4P35443 961 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 POU3F4P49335 361 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 ART1P52961 327 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 PLP2Q04941 152 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 PLA2G7Q13093 441 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 GABRA6Q16445 453 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 PYHIN1Q6K0P9 492 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 POC5Q8NA72 575 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 NAXEQ8NCW5 288 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 RAB40AQ8WXH6 277 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 NANOS1Q8WY41 292 aaKnown RBP13.21□□□□□ -0.29
HDHD3-201ENST00000238379 SNRNP40Q96DI7 357 aaKnown RBP13.21□□□□□ -0.29
HDHD3-201ENST00000238379 BOD1Q96IK1 185 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 RGCCQ9H4X1 137 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 METTL17Q9H7H0 456 aaPredicted RBP13.21□□□□□ -0.29
HDHD3-201ENST00000238379 RHBDL2Q9NX52 303 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 TBC1D24Q9ULP9 559 aa13.21□□□□□ -0.29
HDHD3-201ENST00000238379 IGKV1-9A0A0C4DH69 117 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 LOC100289279A0A1B0GTE1 492 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 DHRS7CA6NNS2 312 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 RAD51DO75771 328 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 ERCC1P07992 297 aaPredicted RBP13.2□□□□□ -0.3
HDHD3-201ENST00000238379 HOXD4P09016 255 aaPredicted RBP13.2□□□□□ -0.3
HDHD3-201ENST00000238379 TMIGD3P0DMS9 266 aaPredicted RBP13.2□□□□□ -0.3
HDHD3-201ENST00000238379 CCL2P13500 99 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 FAHP16930 419 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 ACKR3P25106 362 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 TIMP3P35625 211 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 NR4A2P43354 598 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 ZNF92Q03936 586 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 TNK1Q13470 666 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 TRIM16LQ309B1 348 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 MDP1Q86V88 176 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 CCDC36Q8IYA8 594 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 ZNF610Q8N9Z0 462 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 OR4D6Q8NGJ1 314 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 PP6455Q8WZ26 134 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 SPSB4Q96A44 273 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 HAVCR1Q96D42 359 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 SORCS2Q96PQ0 1159 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 CNTD2Q9H8S5 307 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 PIGLQ9Y2B2 252 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 INTS1Q8N201 2190 aaKnown RBP13.2□□□□□ -0.3
HDHD3-201ENST00000238379 SPENQ96T58 3664 aaKnown RBP13.2□□□□□ -0.3
HDHD3-201ENST00000238379 CIB4A0PJX0 185 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms