RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 EIF2S3P41091 472 aaKnown RBP10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 CAPZA2P47755 286 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 EFNB2P52799 333 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 NANOS3P60323 173 aaKnown RBP10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 CSNK2A1P68400 391 aaPredicted RBP10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 SLC35A1P78382 337 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 FGL1Q08830 312 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 SGCAQ16586 387 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 MESTQ5EB52 335 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 HACD4Q5VWC8 232 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 DND1Q8IYX4 353 aaKnown RBP10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 NPEPL1Q8NDH3 523 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 OR10AC1Q8NH08 325 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 C7orf50Q9BRJ6 194 aaKnown RBP10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 RBM24Q9BX46 236 aaKnown RBP10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 FOXJ3Q9UPW0 622 aa10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 COA3Q9Y2R0 106 aaPredicted RBP10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 KLF13Q9Y2Y9 288 aaPredicted RBP10.4□□□□□ -0.75
TNFAIP1-201ENST00000226225 DOCK10Q96BY6 2186 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 ARPC4-TTLL3A0A0A6YYG9 625 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 AGPAT2O15120 278 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 ARPC3O15145 178 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 ZNHIT1O43257 154 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 RAMP1O60894 148 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 DAP3P51398 398 aaKnown RBP10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 BDH1Q02338 343 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 LRRTM1Q86UE6 522 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 TMEM178AQ8NBL3 297 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 UQCC2Q9BRT2 126 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 TXNIPQ9H3M7 391 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 POFUT1Q9H488 388 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 GLS2Q9UI32 602 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 B3GALT5Q9Y2C3 310 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 NOP16Q9Y3C1 178 aaKnown RBP10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 KANTRA0A1W2PQU2 76 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 GJE1A6NN92 205 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 F8W036 122 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 ZIC3O60481 467 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 B3GALNT1O75752 331 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 NEURL1O76050 574 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 NDUFB6O95139 128 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 ITGB2P05107 769 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 CLDN15P56746 228 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 RPS11P62280 158 aaKnown RBP eCLIP10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 BLOC1S1P78537 153 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 SWI5Q1ZZU3 235 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 KCTD9Q7L273 389 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 GTPBP8Q8N3Z3 284 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 OR1S2Q8NGQ3 325 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 NAA11Q9BSU3 229 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 IFT22Q9H7X7 185 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 FREM3P0C091 2139 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 PRSS37A4D1T9 235 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 SP1P08047 785 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 SRD5A2P31213 254 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 SLC10A1Q14973 349 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 C9orf135Q5VTT2 229 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 LINC00346Q8IVM7 164 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 OR51A4Q8NGJ6 313 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 ESRP2Q9H6T0 727 aaKnown RBP10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 WDR76Q9H967 626 aa10.39□□□□□ -0.75
TNFAIP1-201ENST00000226225 LOC400499M0QZD8 3231 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 A0A087WZY1 265 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 A0A0J9YW62 118 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 TMEM272A0A1B0GTI8 110 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 C13orf42A0A1B0GVH6 325 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 ANKRD20A5PA0PJZ0 165 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 OR2AT4A6NND4 320 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 EEF1E1-BLOC1S5C9J1V9 151 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 ZNF208O43345 1280 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 NDUFA2O43678 99 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 RAG2P55895 527 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 B2MP61769 119 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 GLO1Q04760 184 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 RBM39Q14498 530 aaKnown RBP10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 RBMS2Q15434 407 aaKnown RBP10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 TRAM1Q15629 374 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 RHOUQ7L0Q8 258 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 CD163Q86VB7 1156 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 PUSL1Q8N0Z8 303 aaKnown RBP10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 THAP6Q8TBB0 222 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 ADAMTS17Q8TE56 1095 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 PNPLA2Q96AD5 504 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 MRPL48Q96GC5 212 aaKnown RBP10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 VRK1Q99986 396 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 POTEKPQ9BYX7 375 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 TM4SF5O14894 197 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 MPZL1O95297 269 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 NFYBP25208 207 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 FLI1Q01543 452 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 CORO6Q6QEF8 472 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 COMMD2Q86X83 199 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 ZNF676Q8N7Q3 588 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 TTTY12Q9BZ98 90 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 DNTTIP1Q9H147 329 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 SLITRK2Q9H156 845 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 HDGFL3Q9Y3E1 203 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 CTLA4P16410 223 aa10.38□□□□□ -0.75
TNFAIP1-201ENST00000226225 RAC1P63000 192 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms