RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF816-ZNF321PA0A0X1KG74 233 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 NKX2-2O95096 273 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 HTR1FP30939 366 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 SNAPC3Q92966 411 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 ISL2Q96A47 359 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 ANKRD9Q96BM1 317 aaPredicted RBP12.31□□□□□ -0.44
SIX4-201ENST00000216513 KCNJ15Q99712 375 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 C20orf24Q9BUV8 137 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 SLC6A13Q9NSD5 602 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 LAMP3Q9UQV4 416 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 GLAP06280 429 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 TAS2R46P59540 309 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 AQP6Q13520 282 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 RNLSQ5VYX0 342 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 PFDN5Q99471 154 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 S1PR3Q99500 378 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 OR2B2Q9GZK3 357 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 TAS2R4Q9NYW5 299 aa12.31□□□□□ -0.44
SIX4-201ENST00000216513 CNOT11Q9UKZ1 510 aaKnown RBP12.31□□□□□ -0.44
SIX4-201ENST00000216513 A0A1W2PR77 199 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 RPL23AP62750 156 aaKnown RBP12.3□□□□□ -0.44
SIX4-201ENST00000216513 RTL8BQ17RB0 113 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 ACSM5Q6NUN0 579 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 TMEM81Q6P7N7 255 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 OR51A2Q8NGJ7 313 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 MRI1Q9BV20 369 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 BCO1Q9HAY6 547 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 SLCO1B1Q9Y6L6 691 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 PCMT1P22061 227 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 HIKESHIQ53FT3 197 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 CST9LP1Q5W188 147 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 IDO2Q6ZQW0 420 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 SLC38A1Q9H2H9 487 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 SLC23A1Q9UHI7 598 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 KCNG2Q9UJ96 466 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 PPP1R3CQ9UQK1 317 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 LIPGQ9Y5X9 500 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 ZNF32P17041 273 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 NME2P22392 152 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 PEBP1P30086 187 aaKnown RBP12.3□□□□□ -0.44
SIX4-201ENST00000216513 FMODQ06828 376 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 INSL4Q14641 139 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 CDONQ4KMG0 1287 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 RPEQ96AT9 228 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 FYTTD1Q96QD9 318 aaKnown RBP12.3□□□□□ -0.44
SIX4-201ENST00000216513 HNRNPFP52597 415 aaKnown RBP12.3□□□□□ -0.44
SIX4-201ENST00000216513 CLVS2Q5SYC1 327 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 TMEM251Q8N6I4 163 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 HMGCLL1Q8TB92 370 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 SLC7A13Q8TCU3 470 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 UPRTQ96BW1 309 aa12.3□□□□□ -0.44
SIX4-201ENST00000216513 ZNF486Q96H40 463 aaPredicted RBP12.3□□□□□ -0.44
SIX4-201ENST00000216513 ISG20L2Q9H9L3 353 aaKnown RBP12.3□□□□□ -0.44
SIX4-201ENST00000216513 K7ESF4 209 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 FADS1O60427 444 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 TMEM65Q6PI78 240 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 OR2AK2Q8NG84 335 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 CCDC32Q9BV29 185 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 PBOV1Q9GZY1 135 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 TOMM34Q15785 309 aaPredicted RBP12.29□□□□□ -0.44
SIX4-201ENST00000216513 OGFOD3Q6PK18 319 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 DLEU7Q6UYE1 221 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 NOXA1Q86UR1 476 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 LRRC29Q8WV35 223 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 DPF1Q92782 380 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 MBOAT4Q96T53 435 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 A6NHS1 94 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 ACOT8O14734 319 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 GPR6P46095 362 aaPredicted RBP12.29□□□□□ -0.44
SIX4-201ENST00000216513 RAC3P60763 192 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 OR10K2Q6IF99 312 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 RNF128Q8TEB7 428 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 PPA2Q9H2U2 334 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 GPRIN2O60269 458 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 GDNFP39905 211 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 UBE2NLQ5JXB2 153 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 DPPA2Q7Z7J5 298 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 ALDH3B2P48448 385 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 BAMBIQ13145 260 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 CBLN3Q6UW01 205 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 A4GNTQ9UNA3 340 aa12.29□□□□□ -0.44
SIX4-201ENST00000216513 GAPDHSO14556 408 aaPredicted RBP12.28□□□□□ -0.44
SIX4-201ENST00000216513 CSF1P09603 554 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 RAE1P78406 368 aaKnown RBP12.28□□□□□ -0.44
SIX4-201ENST00000216513 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 KIRREL1Q96J84 757 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 UGT2A1Q9Y4X1 527 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 CROCCQ5TZA2 2017 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 MED6O75586 246 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 RRAS2P62070 204 aaPredicted RBP12.28□□□□□ -0.44
SIX4-201ENST00000216513 PINX1Q96BK5 328 aaKnown RBP12.28□□□□□ -0.44
SIX4-201ENST00000216513 IMPA2O14732 288 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 TMPRSS2O15393 492 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 SPRY1O43609 319 aaPredicted RBP12.28□□□□□ -0.44
SIX4-201ENST00000216513 MRPS34P82930 218 aaKnown RBP12.28□□□□□ -0.44
SIX4-201ENST00000216513 LIPNQ5VXI9 398 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 SFXN4Q6P4A7 337 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 OR4M1Q8NGD0 313 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 PERPQ96FX8 193 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms