RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 FBXW5Q969U6 566 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 AKIP1Q9NQ31 210 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 NDRG3Q9UGV2 375 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 FAM221AA4D161 298 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 SLC22A20A6NK97 555 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 B4GALT1P15291 398 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 PI3P19957 117 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 TGM1P22735 817 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 TGFBR1P36897 503 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 AQP6Q13520 282 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 ANKRD16Q6P6B7 361 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 PRDM7Q9NQW5 492 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 DCTDP32321 178 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 PIGPP57054 158 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 RAB1AP62820 205 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 C12orf73Q69YU5 71 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 FAAP20Q6NZ36 180 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF485Q8NCK3 441 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 OTOSQ8NHW6 89 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 A4GNTQ9UNA3 340 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 IGLV3-16A0A075B6K0 115 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 NKX2-2O95096 273 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 GPNMBQ14956 572 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 SMIM21Q3B7S5 101 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 OR5M8Q8NGP6 311 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 APOBEC3DQ96AK3 386 aaPredicted RBP12.24□□□□□ -0.45
SF3A1-201ENST00000215793 ING1Q9UK53 422 aaPredicted RBP12.24□□□□□ -0.45
SF3A1-201ENST00000215793 FLVCR2Q9UPI3 526 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 PPIL1Q9Y3C6 166 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 ASCC3Q8N3C0 2202 aaKnown RBP12.24□□□□□ -0.45
SF3A1-201ENST00000215793 A0A0B4J203 849 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 TUBAL3A6NHL2 446 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 PRKNO60260 465 aaPredicted RBP12.24□□□□□ -0.45
SF3A1-201ENST00000215793 FAM157BP0CG42 384 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 HAGHQ16775 308 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 TSEN54Q7Z6J9 526 aaKnown RBP12.24□□□□□ -0.45
SF3A1-201ENST00000215793 NOXO1Q8NFA2 376 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 SAT2Q96F10 170 aaPredicted RBP12.24□□□□□ -0.45
SF3A1-201ENST00000215793 NMES1Q9C002 83 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 GNB4Q9HAV0 340 aa12.24□□□□□ -0.45
SF3A1-201ENST00000215793 TNFSF11O14788 317 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 TNFSF15O95150 251 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 UBE2MP61081 183 aaKnown RBP12.23□□□□□ -0.45
SF3A1-201ENST00000215793 OR2B11Q5JQS5 317 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 RPUSD3Q6P087 351 aaKnown RBP12.23□□□□□ -0.45
SF3A1-201ENST00000215793 OR4C16Q8NGL9 310 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 OR5B3Q8NH48 314 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 BPIFB3P59826 476 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 NLRC3Q7RTR2 1065 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 TMEM229BQ8NBD8 167 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 OR4F5Q8NH21 305 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 SPSB1Q96BD6 273 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 MRPS24Q96EL2 167 aaKnown RBP12.23□□□□□ -0.45
SF3A1-201ENST00000215793 DERL3Q96Q80 235 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 OR4F4Q96R69 305 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 AUNIPQ9H7T9 357 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 TMEM9BQ9NQ34 198 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 SLC25A1P53007 311 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF90Q03938 601 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 CEACAM16Q2WEN9 425 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 CDONQ4KMG0 1287 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 TMEM123Q8N131 208 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 TAAR6Q96RI8 345 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 RYDENQ9NUL5 291 aaKnown RBP12.23□□□□□ -0.45
SF3A1-201ENST00000215793 OR5G3P0C626 314 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 FGF9P31371 208 aaPredicted RBP12.23□□□□□ -0.45
SF3A1-201ENST00000215793 UBE2IP63279 158 aaKnown RBP12.23□□□□□ -0.45
SF3A1-201ENST00000215793 TMEM128Q5BJH2 165 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 RNF165Q6ZSG1 346 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 LRRC61Q9BV99 259 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
SF3A1-201ENST00000215793 A0A0B4J2E0 115 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 A0A1B0GX12 115 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 TRIM77I1YAP6 450 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 FABP6P51161 128 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 PPP1R1CQ8WVI7 109 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 C10orf90Q96M02 699 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 FOXB1Q99853 325 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 CHST6Q9GZX3 395 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 DDX60Q8IY21 1712 aaKnown RBP12.22□□□□□ -0.45
SF3A1-201ENST00000215793 PHIPQ8WWQ0 1821 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 IGHV3-15A0A0B4J1V0 119 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 GABRG2P18507 467 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 ATF1P18846 271 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 GALP22466 123 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 WFDC8Q8IUA0 241 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 NDFIP1Q9BT67 221 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 MMP25Q9NPA2 562 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 CYSLTR2Q9NS75 346 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 PSENENQ9NZ42 101 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 KNTC1P50748 2209 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 IGHV3-64DA0A0J9YX35 117 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 M0R1B8 84 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
SF3A1-201ENST00000215793 FAM162BQ5T6X4 162 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF787Q6DD87 383 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 OR2A2Q6IF42 318 aa12.22□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF391Q9UJN7 358 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms