RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TERB2Q8NHR7 220 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 NUBPLQ8TB37 319 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 PTX4Q96A99 478 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 PARP12Q9H0J9 701 aaKnown RBP12.45□□□□□ -0.42
USH1C-201ENST00000005226 UQCC1Q9NVA1 299 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 ZNF319Q9P2F9 582 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 ZNF107Q9UII5 783 aaPredicted RBP12.45□□□□□ -0.42
USH1C-201ENST00000005226 CPAMD8Q8IZJ3 1885 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 HOXB5P09067 269 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 MUC1P15941 1255 aaPredicted RBP12.45□□□□□ -0.42
USH1C-201ENST00000005226 HSD11B1P28845 292 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 GALNSP34059 522 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 RAB13P51153 203 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 TMEM50BP56557 158 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 FBXW4P57775 412 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 ELAVL1Q15717 326 aaKnown RBP12.45□□□□□ -0.42
USH1C-201ENST00000005226 RSPO4Q2I0M5 234 aaPredicted RBP12.45□□□□□ -0.42
USH1C-201ENST00000005226 CARD17Q5XLA6 110 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 DRAM2Q6UX65 266 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 SLC30A7Q8NEW0 376 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 NPRL2Q8WTW4 380 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 RNF133Q8WVZ7 376 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 FAM71F1Q96KD3 344 aaPredicted RBP12.45□□□□□ -0.42
USH1C-201ENST00000005226 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 TPSD1Q9BZJ3 242 aa12.45□□□□□ -0.42
USH1C-201ENST00000005226 KLF2Q9Y5W3 355 aaPredicted RBP12.45□□□□□ -0.42
USH1C-201ENST00000005226 LINC01387J3KSC0 135 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 NME2P22392 152 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 S100A10P60903 97 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 FOXK1P85037 733 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 HSF1Q00613 529 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 TLE3Q04726 772 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 RAB32Q13637 225 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 ZNF528Q3MIS6 628 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 COL13A1Q5TAT6 717 aaPredicted RBP12.44□□□□□ -0.42
USH1C-201ENST00000005226 KLHL24Q6TFL4 600 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 RAB11FIP2Q7L804 512 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 OR10H5Q8NGA6 315 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 RXFP4Q8TDU9 374 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 ARHGAP5-AS1Q96IT6 56 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 USB1Q9BQ65 265 aaKnown RBP12.44□□□□□ -0.42
USH1C-201ENST00000005226 SLC7A5P2Q9GIP4 190 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 METTL8Q9H825 291 aaKnown RBP12.44□□□□□ -0.42
USH1C-201ENST00000005226 TMEM100Q9NV29 134 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 SUSD2Q9UGT4 822 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 C5orf63A6NC05 138 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 C9JQL5 133 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 BPNT1O95861 308 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 SERPINA5P05154 406 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 MMP16P51512 607 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 SUPT4H1P63272 117 aaKnown RBP12.44□□□□□ -0.42
USH1C-201ENST00000005226 PDZK1IP1Q13113 114 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 TDGQ13569 410 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 PGAP1Q75T13 922 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 OR5D14Q8NGL3 314 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 NKX2-4Q9H2Z4 354 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 ACKR4Q9NPB9 350 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 CLEC1BQ9P126 229 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 CYB5R1Q9UHQ9 305 aa12.44□□□□□ -0.42
USH1C-201ENST00000005226 MRPS28Q9Y2Q9 187 aaKnown RBP12.44□□□□□ -0.42
USH1C-201ENST00000005226 TMEM14DPA8MWL7 114 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 ADAM10O14672 748 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 LRP3O75074 770 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 FBXO24O75426 580 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 MRPS21P82921 87 aaKnown RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 RPL7L1Q6DKI1 246 aaKnown RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 DHRS7BQ6IAN0 325 aaPredicted RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 H1FNTQ75WM6 255 aaPredicted RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 GALNTL5Q7Z4T8 443 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 SPAG16Q8N0X2 631 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 PNLDC1Q8NA58 520 aaKnown RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 OR1L3Q8NH93 324 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 RAB3CQ96E17 227 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 GPR132Q9UNW8 380 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 MEX3AA1L020 520 aaKnown RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 IGHMP01871 453 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 SFTPBP07988 381 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 ZNF20P17024 532 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 DRD1P21728 446 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 MPZP25189 248 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 LPAR6P43657 344 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 HOXA1P49639 335 aaPredicted RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 CTAG1AP78358 180 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 TMEM128Q5BJH2 165 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 CLEC9AQ6UXN8 241 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 ABHD12BQ7Z5M8 362 aaPredicted RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 RTBDNQ9BSG5 229 aaPredicted RBP12.43□□□□□ -0.42
USH1C-201ENST00000005226 VN1R1Q9GZP7 353 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 RHOFQ9HBH0 211 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 COPS7AQ9UBW8 275 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 FLVCR1Q9Y5Y0 555 aa12.43□□□□□ -0.42
USH1C-201ENST00000005226 A0A1W2PQD3 144 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 CRTAPO75718 401 aaPredicted RBP12.42□□□□□ -0.42
USH1C-201ENST00000005226 SFT2D2O95562 160 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 KNG1P01042 644 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 RFC3P40938 356 aa12.42□□□□□ -0.42
USH1C-201ENST00000005226 OR1D5P58170 312 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms