RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Cass4Q08EC4 804 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Adgrd1Q80T32 903 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 CslQ80X68 466 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tssk5Q8C1R0 372 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1086Q8VFL9 310 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr572Q8VGZ3 318 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Hdac8Q8VH37 377 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Dmac2Q9D7K5 258 aaKnown RBP15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Sh2b3O09039 548 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Spi1P17433 272 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Rasd2P63032 266 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Dmrtc1bQ2PMX6 267 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Selenbp2Q63836 472 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr512Q8VFZ4 326 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 NpvfQ9ESQ8 188 aa15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Hapln1Q9QUP5 356 aaKnown RBP15.27■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tmem38aQ3TMP8 298 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Kcmf1Q80UY2 381 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tmem150bQ8R218 238 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr790Q8VGJ3 322 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Kcne5Q9QZ26 143 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Npas3Q9QZQ0 925 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm14403A2BFU4 402 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 LipkQ8BM14 398 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr878Q9EQA9 314 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Lrp5Q91VN0 1614 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm7697A0A0J9YUH2 350 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm9495A0A0J9YUZ3 350 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Ms4a18J3QN01 344 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 DhodhO35435 395 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 P2rx6O54803 389 aa15.27■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm6880A3KG45 208 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Scgb1b29D2XZ31 93 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Scgb1b20E9PWZ2 93 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Klk1P15947 261 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Hist1h1bP43276 223 aaKnown RBP15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1442Q0VEV7 312 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Dmrt1Q9QZ59 374 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 LipgQ9WVG5 500 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Ctla4P09793 223 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tmem45bQ8VCZ2 278 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Rhox2fA2ANE0 191 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr59B1ARL3 323 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm21970F6XX07 295 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 GamtO35969 236 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Map2k4P47809 397 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Enkd1Q7TSV9 346 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Poldip2Q91VA6 368 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Slc46a3Q9DC26 460 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Prl5a1Q9JII2 230 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mrgpra9A0A140T8U8 332 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 H60cB1B213 197 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tex264E9Q137 309 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gpr153Q8K0Z9 631 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r19Q8R2C7 308 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr114Q923Q8 312 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Zfp988F6VKC7 633 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm6665F6Y363 85 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Klk1b16P04071 261 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 CtsaP16675 474 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Acaa2Q8BWT1 397 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1424Q8VFV1 313 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Fzd9Q9R216 592 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Zfp407G3UVV3 2246 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1107A2AVB8 312 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 S100a3P62818 101 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tra2aQ6PFR5 281 aaKnown RBP15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Zfp729bQ80VN4 1045 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Lgi3Q8K406 548 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r26Q8R2D7 339 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 L3hypdhQ9CXA2 354 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Chst13D3Z6E3 336 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr608E9Q564 316 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Cldn2O88552 230 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Fzd7Q61090 572 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Rad51ap1Q8C551 337 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 TprkbQ8QZZ7 175 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Cnih4Q9CX13 139 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr159Q9QZ19 319 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 MgllO35678 303 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 RidaP52760 135 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Ranbp10Q6VN19 620 aaKnown RBP15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Spaca9Q7TPM5 168 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Pggt1bQ8BUY9 377 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mblac1Q8BWY4 260 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r23Q8R2D0 302 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Wdr74Q8VCG3 384 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr281Q8VET6 311 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 TsaccQ9DA44 124 aa15.26■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Ighv16-1A0A0A6YW39 117 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 MiipA2A7Y5 387 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 DffbO54788 344 aaKnown RBP15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Cks2P56390 79 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Hormad2Q5SQP1 306 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Adam21Q9JI76 729 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Adam23Q9R1V7 829 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Dmrta2A2A9A2 531 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Zfp40B1B1D3 796 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r174E9PYW5 313 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r173E9Q8V7 313 aa15.25■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms